=Paper=
{{Paper
|id=Vol-1114/Poster_van_der_Horst
|storemode=property
|title=Workflows and Services for Concept Profile Generation
|pdfUrl=https://ceur-ws.org/Vol-1114/Poster_van_der_Horst.pdf
|volume=Vol-1114
|dblpUrl=https://dblp.org/rec/conf/swat4ls/HorstRH13
}}
==Workflows and Services for Concept Profile Generation==
Workflows and Services for Concept Profile Generation
Eelke van der Horst1, Marco Roos1, 2, Kristina Hettne1
1 Department of Human Genetics, Leiden University Medical Centre, Leiden, The Netherlands
2 Netherlands BioInformatics Centre, The Netherlands
Abstract. Concept profile matching is a knowledge discovery method that
proved successful in generating hypotheses about molecular mechanisms ex-
plaining the results from genotype-phenotype studies. This technology has been
implemented in the Anni standalone application (http://biosemantics.org/anni)
and web service (http://www.biocatalogue.org/services/3330). At the core of this
technology are the concept profiles, which had to be generated using a number
of custom scripts and manual operations. To move towards a more customizable
and service oriented architecture of the concept profile generation pipeline, we
developed a set of workflows and services that represent individual steps of the
pipeline. To aid interoperability, semantic web standards have been adopted to
interface with these components. Here, we report progress on the development of
the pipeline and publication at myExperiment (http://www.myexperi-
ment.org/groups/1129).