<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.0 20120330//EN" "JATS-archivearticle1.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink">
  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>Rough-Fuzzy Granularity in the study of optical phenomena</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Ana Lucia Dai Pra</string-name>
          <email>daipra@fi.mdp.edu.ar</email>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Lucía Isabel Passoni</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Faculty of engineering, National University of Mar del Plata</institution>
          ,
          <addr-line>Mar del Plata</addr-line>
          ,
          <country country="AR">Argentina</country>
        </aff>
      </contrib-group>
      <abstract>
        <p>Granular computing deals with information representation in the form of a number of entities or information granules. Information granules are made up of a collection of entities, usually of numeric level, joined due to their similarity, functional adjacency, indistinguishability, coherence or alikeness. The granular computing is associated to sets concepts, such as fuzzy sets, rough sets, intervals. In this work is considered the application of Rough-Fuzzy Granularity to the detection of optical phenomena in registered videos. Basically these phenomena are dynamic laser speckle and ecography videos. .</p>
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>-</title>
      <p>In granular computing the information is grouped in entities
that fulfill conditions of similarity, being the granules,
conceptual entities that emerge as a direct consequence of
the quest for the identification of abstract objects and its
processing [Zadeh, 1970], [Pedrycz, 2001], [Yao, 2004].
The fuzzy sets and rough sets are a suitable way to define
information granules.</p>
      <p>The identification of information granules is context
dependent and is expected that achieve two intuitive
requirements: Justifiable granularity and Semantic
meaningfulness. For numeric data, the requirement of
Justifiable granularity is quantified by counting the number
of data falling within the bounds of the granule, and the
requirement of semantic meaningfulness is quantified by the
length of the granule [Wang et al., 2015].</p>
      <p>The dynamic laser speckle and ecography videos
exhibit special characteristics.</p>
      <p>Speckle is a phenomenon that allows to detect activity in
several objects through the lighting with laser beams.
Speckle generate an interference pattern formed by coherent
radiation of a medium containing many sub-resolution
scatterers in move. In order to register the phenomenon,
successive images can be obtained with CCD cameras with
a suitable resolution and in stable conditions [Rabal and
Braga, 2008].</p>
      <p>In ecography images, the speckles are a nuisance that is
desired to diminish to improve recognition and resolution
[Damerjiana et al., 2014], [Hiremath et al., 2013] .
In both cases, laser and ultrasound, a stable speckle pattern
is achieved when the scatterers don´t move however when
the sample has certain activity it is translated to the
scatterers movement, the dynamic of the speckle pattern is
used to evaluate the scatterer movements.</p>
      <p>In this work we propose using a method based on
roughfuzzy granular computing to detect regions of interest in
ecographies and Speckle image stack and also in single
frames, since each of them would allow detecting different
types of features. Then, temporal and spatial granularity is
analyzed.
.</p>
    </sec>
    <sec id="sec-2">
      <title>2 Methodology</title>
    </sec>
    <sec id="sec-3">
      <title>2.1 Granular Computing</title>
      <p>In granular computing the information is grouped in entities
that fulfill conditions of similarity, being the granules,
conceptual entities that emerge as a direct consequence of
the quest for the identification of abstract objects and its
processing.. The fuzzy sets and rough sets are a suitable way
to define granules.</p>
      <p>In the signal processing, the information granules contribute
to condensing a signal and represent it as a set of temporal
granules through an abstraction mechanism that synthesizes
the information. This representation preserves the granules
identity in spite of some small fluctuations occurring within
the experimental data [Bargiela and Pedrycz, 2003] . This
type of condensation moves the signal from the numeric
level up to the symbolic processing layer. The granules size
and quantity implies a level of abstraction that is achieved
(figure 1).</p>
      <p>In spatial granulation the individual pixels of an image are
arranged into larger entities and processed as such or density
pixels with determined characteristic are analyzed in small
windows. In small windows, the image is built with pixels
computed as the sum of elements quantity belonging to the
same fuzzy concept in a slide window of NxN, where the
pixel is in the left-upper side. Thus, the image does not lose
resolution, only it loses an edge of N-1 pixels (figure 2).
defining its possible attributes, the subsets X ⊆ U and B⊆
A, and an equivalence class [x]B which defines a relation in
which elements in X are indiscernible from each other by
attributes from B, a rough set is defined by the sets
{x∈U:[x]B ⊆ X} and {x∈U:[x]B ∩ X ≠ ∅ } which are
denominated as B-lower approximation and B-upper
approximation of X in B respectively. These rough sets are
denoted as BX and B X respectively. The objects in BX are
certainly members of B and the objects in B X are possibly
members in B [Pawlak, 1982], [Pawlak and Skowron,
2007]. If B is a fuzzy attribute, the sets are rough-fuzzy sets
[Jensen, 2002]
To define the fuzzy-rough regions for each Ck concept,
image intensity histogram is analyzed to find an equitable
distribution for the number of pixels that will correspond to
each lower approximation and boundary region (figure 3).
To granulate a signal TS(x,y) of length n, corresponding to the
(x,y) pixel, successions of equal equivalence classes [i]Ck are
considered (upper approximation). A granule ends when an
equivalence class membership is zero.
12 Dark
granules
9 Medium
granules
12 Light
granules
2.2 Selection of Fuzzy-Rough sets
The theory of fuzzy sets, that permits the handling of
vagueness and overlapped concepts, makes easy the
adequate definition of intensity grains as they are inherent in
speckle phenomena. By definition [Zadeh, 1965], [Dubois
and Prade, 1980], given a Universal set U of elements ui , a
fuzzy set A∈U is defined by pairs of elements (ui, μA(ui)),
where μA(ui) is a real value in [0,1] that represent the
membership degree of ui to A. In this case, the U set is given
by intensity values I(x,y) ∈ [0,255], and the fuzzy set are
defined by membership functions µCk(I(x,y)), with C ∈
{dark, medium, light} conceptual sets that define
characteristics of the intensity pixels. These fuzzy sets
facilitate the interpretation of subjective terms with
indefinite limits.</p>
      <p>A rough set is an approximation of a vague concept by a
pair of precise concepts. Rough sets are based on the fact
that an object cannot always be defined in precise form
(crisply) inside a category on the basis of the value of its
attributes.</p>
      <p>Formally a rough set is expressed as:
Given an information system S = (U,A), with U the
universal set defining all the objects to consider, the A set
Gr(x,y) ( j, k) =  1 if TS(x,y) ( j −1)Ck =1 and TS(x,y) ( j)Ck = 0
 0 in other case
with j=1, n and k =1,2,3
The Temporal Rough-Fuzzy Granularity (TRFG) is
computed as the granule quantities Gr in j= n time for k
equivalence classes. Eq (1) and (2)</p>
      <p> 3 n 
TRFG( x, y ) =  ∑ ∑ Gr( x,y ) (i, j) / n</p>
      <p> k =1 j =2 
The Rough-Fuzzy spatial granularity (SRFG) is computed as
the relative pixels quantities corresponding to equivalence
classes [i]Ck in a window of m*m, where P(x,y) indicate a
pixel. Eq (3)
(1)
(2)
 3 m m 
SRFG( x, y ) =  ∑ ∑ ∑ [P(x + i, y + j)]Ck  / (m * m)
 k =1 i=0 j =0 
The computed pixel value will be greater when the window
pixels belong to the boundary regions (the pixel belongs to
more than one fuzzy concept). This feature could be
interpreted as corresponding to the blurring of moving
regions.
(3)</p>
    </sec>
    <sec id="sec-4">
      <title>3 Experiments</title>
    </sec>
    <sec id="sec-5">
      <title>3.1 Speckle</title>
      <p>Speckle is an optical phenomenon that takes place when a
beam of coherent light (laser) illuminates an object with a
surface that is rough in comparison with the wave length.
Light is scattered in all directions and an interference pattern
of granular aspect, called ‘speckle pattern’ can be observed
on a screen. When the object under study presents some
type of activity, such as biological specimens or certain
physical phenomena, the particles of the surface move and
the speckle pattern changes over time. This change permits
the detection and segmentation of different activity degrees
in a diversity of phenomena, allowing us to analyze paint
drying time, imperceptible bruises in fruits, viability of
seeds, bacteria mobility, endosperm phase proportions, etc.
[Rabal and Braga, 2008], [Briers, 2007].</p>
      <p>Stacks of records of successive images are obtained with
CCD cameras with a suitable resolution and in stable
conditions. The variation of each pixel value over time,
considered as a time series, can be analyzed by applying
different technologies of signal processing to obtain values
that describe its behavior. The set of the values or
descriptors obtained in every pixel generates an image
whereby it is possible to detect regions with different
characteristics.</p>
      <p>Many of the methods has been studied to analyze dynamic
speckle patterns require a high number of images to obtain
good results. In some cases, the time of evolution of the
analyzed activity is not known a priori and changes inside
the time required for the register are lost. Also, records
taken beyond the end of the studied events reduce the
efficacy of the analysis because of the recording of assumed
activity that has already finished, changed or reduced.
Nonstationary phenomena cannot be detected.
require the register of images stack where the time history
of each pixel is analyzed as a time series [Rabal and Braga,
2008]. Less frequent, single frame estimation techniques,
such as local spatial contrast measurements [Briers, 2007]
have been reported and used in actual applications with the
advantages of being able to follow non-stationary processes.
The temporal granular computing has been applied to obtain
descriptors in dynamic speckle, it provided satisfactory
results in the detection of regions with different activity
characteristic [Dai Pra et. al, 2009], besides, can perform
almost real-time analysis of unquestionable importance in
the inspection of biological, physical and / or chemical
processes [Todorovich et al., 2013].</p>
    </sec>
    <sec id="sec-6">
      <title>3.2 Ecography</title>
      <p>Usually, speckles observed in ultrasound images are only an
artifact, a nuisance that is desired to diminish to improve
recognition and resolution. In that direction most efforts
were directed. To improve the performance of that
technique, the instruments are usually provided with filters
that smooth slow speckle motions effects, thus avoiding the
dynamics that constitute speckle.</p>
      <p>In both cases, laser and ultrasound, a stable speckle pattern
is achieved when the scatterers don´t move, therefore the
dynamic of the speckle pattern is used to evaluate the
scatterer movements.</p>
      <p>Activity measurement has shown a noticeable increase in
research interest in the last few years. Laser speckle patterns
show dynamic behavior when one or more mechanisms act
on the observed sample, such as: Doppler Effect, diffusion,
optical polarization activity [Briers, 2007].</p>
    </sec>
    <sec id="sec-7">
      <title>4 Coments and results</title>
      <p>Figure 5 shows the result of the processing of a coin with a
coat of fresh paint. The zones with relief have more activity
and this allows to visualize the different reliefs of the coin.
This experiment is very useful in the study of times of dried
of paintings.</p>
      <p>Figure 6 a) shows a ecography of eye tumor. Figure 6b) is
the result of a temporal process, a semi posterior oval region
with, seemingly, light dots in the middle that can be
estimated could be blood vessels of neo-vascularization
(Doppler effect), making very simple the differentiation
between both pathologies.</p>
      <p>Figure 6c) is the result of a spatial process, retina can be
seen that cannot be perceived in the other images.
Figure 7 shows pulmonar ecographies that allow to evaluate
the efficiency of the maneuver of alveolar recruitment
across a dynamic monitoring, optimizing the strategy
ventilatoria during the general anesthesia. The processing of
the video would allow the quantification of the re-aeration
and of the loss of pulmonary aeration, in order to contribute
to not subjective elements in the interpretation of results.</p>
    </sec>
  </body>
  <back>
    <ref-list>
      <ref id="ref1">
        <mixed-citation>
          [
          <string-name>
            <surname>Al-Hmouz</surname>
          </string-name>
          et.al.,
          <year>2015</year>
          ]
          <string-name>
            <given-names>Rami</given-names>
            <surname>Al-Hmouz</surname>
          </string-name>
          , Witold Pedrycz,
          <string-name>
            <given-names>Abdullah</given-names>
            <surname>Balamash</surname>
          </string-name>
          .
          <article-title>Description and prediction of time series: A general framework of Granular Computing</article-title>
          ,
          <source>Expert Systems with Applications</source>
          <volume>42</volume>
          :
          <fpage>4830</fpage>
          -
          <lpage>4839</lpage>
          .
          <year>2015</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref2">
        <mixed-citation>
          <source>[Bargiela and Pedrycz</source>
          , 2003]
          <string-name>
            <surname>Bargiela</surname>
            <given-names>A</given-names>
          </string-name>
          ,
          <string-name>
            <surname>Pedrycz</surname>
            <given-names>W</given-names>
          </string-name>
          <article-title>Granulation of temporal data: a global view on time series</article-title>
          ,
          <source>in: IEEE Proceedings of the 22nd International Conference of the North American Fuzzy Information Processing Society</source>
          .
          <volume>24</volume>
          -
          <issue>26</issue>
          <year>July</year>
          , pp.
          <fpage>191</fpage>
          -
          <lpage>196</lpage>
          .
          <year>2003</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref3">
        <mixed-citation>
          <source>[Briers</source>
          , 2007]
          <string-name>
            <given-names>J. D.</given-names>
            <surname>Briers</surname>
          </string-name>
          ,
          <article-title>Laser speckle contrast imaging for measuring blood flow</article-title>
          ,
          <source>Optica Applicata</source>
          <volume>37</volume>
          <fpage>139</fpage>
          -
          <lpage>152M</lpage>
          .
          <year>2007</year>
        </mixed-citation>
      </ref>
      <ref id="ref4">
        <mixed-citation>
          <article-title>[Dai Pra et</article-title>
          . al,
          <year>2009</year>
          ]
          <string-name>
            <given-names>A. L. Dai</given-names>
            <surname>Pra</surname>
          </string-name>
          ,
          <string-name>
            <given-names>L. I.</given-names>
            <surname>Passoni</surname>
          </string-name>
          ,
          <string-name>
            <given-names>H.</given-names>
            <surname>Rabal</surname>
          </string-name>
          .
          <article-title>Evaluation of laser dynamic speckle signals applying granular computing</article-title>
          .
          <source>Signal Process</source>
          <volume>89</volume>
          <fpage>266</fpage>
          -
          <lpage>274</lpage>
          .
          <year>2009</year>
        </mixed-citation>
      </ref>
      <ref id="ref5">
        <mixed-citation>
          [Damerjiana et al.,
          <year>2014</year>
          ]
          <string-name>
            <given-names>V.</given-names>
            <surname>Damerjiana</surname>
          </string-name>
          ,
          <string-name>
            <given-names>O.</given-names>
            <surname>Tankyevycha</surname>
          </string-name>
          ,
          <string-name>
            <given-names>N.</given-names>
            <surname>Souagb</surname>
          </string-name>
          ,
          <string-name>
            <given-names>E.</given-names>
            <surname>Petita</surname>
          </string-name>
          <article-title>Speckle characterization methods in ultrasound images - A review ,IRBM</article-title>
          . Volume
          <volume>35</volume>
          ,
          <string-name>
            <surname>Issue</surname>
            <given-names>4</given-names>
          </string-name>
          ,
          <string-name>
            <surname>September</surname>
            <given-names>2014</given-names>
          </string-name>
          , Pages
          <fpage>202</fpage>
          -
          <lpage>213</lpage>
        </mixed-citation>
      </ref>
      <ref id="ref6">
        <mixed-citation>
          <source>[Dubois and Prade</source>
          , 1980]
          <string-name>
            <surname>Dubois</surname>
            <given-names>D</given-names>
          </string-name>
          , H.
          <string-name>
            <surname>Prade H. Fuzzy Sets</surname>
            <given-names>Systems</given-names>
          </string-name>
          , Academic Press, New York.
          <year>1980</year>
        </mixed-citation>
      </ref>
      <ref id="ref7">
        <mixed-citation>
          [Hiremath et al.,
          <year>2013</year>
          ]
          <string-name>
            <given-names>P.S.</given-names>
            <surname>Hiremath</surname>
          </string-name>
          , Prema T. Akkasaligar and
          <string-name>
            <given-names>Sharan</given-names>
            <surname>Badiger</surname>
          </string-name>
          .
          <article-title>Speckle Noise Reduction in Medical Ultrasound Images in Advancements and Breakthroughs in Ultrasound Imaging", book edited by Gunti Gunarathne</article-title>
          , Intech. 2013
        </mixed-citation>
      </ref>
      <ref id="ref8">
        <mixed-citation>
          <source>[Jensen</source>
          ,
          <year>2002</year>
          ]
          <string-name>
            <given-names>R.</given-names>
            <surname>Jensen</surname>
          </string-name>
          ,
          <string-name>
            <given-names>Q.</given-names>
            <surname>Shen</surname>
          </string-name>
          ,
          <article-title>Fuzzy-rough sets for descriptive dimensionality reduction</article-title>
          ,
          <source>Fuzzy Systems</source>
          ,
          <year>2002</year>
          .
          <source>FUZZ-IEEE'02. Proceedings of the 2002 IEEE International Conference on</source>
          <volume>1</volume>
          :
          <fpage>29</fpage>
          -
          <lpage>34</lpage>
          .
          <year>2002</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref9">
        <mixed-citation>
          <source>[Pawlak</source>
          , 1982]
          <article-title>Pawlak Z Rough sets</article-title>
          .
          <source>Int J Comput Inf SciI</source>
          ,
          <volume>11</volume>
          :
          <fpage>341</fpage>
          -
          <lpage>356</lpage>
          .
          <year>1982</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref10">
        <mixed-citation>
          <source>[Pawlak and Skowron</source>
          , 2007] Pawlak
          <string-name>
            <surname>Z</surname>
          </string-name>
          ,
          <article-title>Skowron A Rudiments of rough sets</article-title>
          .
          <source>Inform Sciences</source>
          <volume>177</volume>
          :
          <fpage>3</fpage>
          -
          <lpage>27</lpage>
          .
          <year>2007</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref11">
        <mixed-citation>
          <source>[Pedrycz</source>
          , 2001]
          <string-name>
            <surname>Pedrycz W Granular Computing: An Emerging</surname>
            <given-names>Paradigm</given-names>
          </string-name>
          , Phisica- Verlag, Germany,
          <year>2001</year>
        </mixed-citation>
      </ref>
      <ref id="ref12">
        <mixed-citation>
          <source>[Rabal and Braga</source>
          , 2008]
          <string-name>
            <given-names>H. J.</given-names>
            <surname>Rabal</surname>
          </string-name>
          ,
          <string-name>
            <surname>R. A</surname>
          </string-name>
          . Braga (eds.):
          <article-title>Dynamic Laser Speckle and Applications</article-title>
          . CRC Press,
          <year>2008</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref13">
        <mixed-citation>
          [Todorovich et al.,
          <year>2013</year>
          ]
          <string-name>
            <given-names>E.</given-names>
            <surname>Todorovich</surname>
          </string-name>
          ,
          <string-name>
            <given-names>A. L. Dai</given-names>
            <surname>Pra</surname>
          </string-name>
          ,
          <string-name>
            <given-names>L. I.</given-names>
            <surname>Passoni</surname>
          </string-name>
          ,
          <string-name>
            <given-names>M.</given-names>
            <surname>Vazquez</surname>
          </string-name>
          ,
          <string-name>
            <given-names>E.</given-names>
            <surname>Cozzolino</surname>
          </string-name>
          ,
          <string-name>
            <given-names>F.</given-names>
            <surname>Ferrara</surname>
          </string-name>
          ,
          <string-name>
            <given-names>G.</given-names>
            <surname>Bioul</surname>
          </string-name>
          .
          <article-title>Real-time speckle image processing</article-title>
          .
          <source>J Real-Time Image Proc</source>
          .
          <year>2013</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref14">
        <mixed-citation>
          <string-name>
            <surname>[Wang</surname>
          </string-name>
          et al.,
          <year>2015</year>
          ]
          <string-name>
            <given-names>Weina</given-names>
            <surname>Wang</surname>
          </string-name>
          , Witold Pedrycz, Xiaodong Liu.
          <article-title>Time series long-term forecasting model based on information granules and fuzzy clustering</article-title>
          .
          <source>Engineering Applications of Artificial Intelligence</source>
          .
          <volume>41</volume>
          :
          <fpage>17</fpage>
          -
          <lpage>24</lpage>
          .
          <year>2015</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref15">
        <mixed-citation>
          <source>[Yao</source>
          , 2004]
          <article-title>Yao Y Partition Model of Granular Computing</article-title>
          .
          <source>Transactions on Rough Sets I. Lecture Notes in Computer Sci-ence</source>
          Volume
          <volume>3100</volume>
          :
          <fpage>232</fpage>
          -
          <lpage>253</lpage>
          .
          <year>2004</year>
        </mixed-citation>
      </ref>
      <ref id="ref16">
        <mixed-citation>
          <source>[Zadeh</source>
          , 1965]
          <article-title>Zadeh L A Fuzzy sets</article-title>
          .
          <source>Inform. Control</source>
          <volume>8</volume>
          :
          <fpage>338</fpage>
          -
          <lpage>353</lpage>
          .
          <year>1965</year>
          .
        </mixed-citation>
      </ref>
      <ref id="ref17">
        <mixed-citation>
          <source>[Zadeh</source>
          , 1970]
          <string-name>
            <surname>Zadeh L A Toward</surname>
          </string-name>
          <article-title>a theory of fuzzy information granu-lation and its centrality in human reasoning and fuzzy logic</article-title>
          ,
          <source>Fuzzy Sets Syst</source>
          .
          <volume>90</volume>
          :
          <fpage>111</fpage>
          -
          <lpage>127</lpage>
          .
          <year>1970</year>
        </mixed-citation>
      </ref>
    </ref-list>
  </back>
</article>