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  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>Unified System for Processing Real and Simulated Data in the ATLAS Experiment</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>© Kaushik De</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
          <xref ref-type="aff" rid="aff2">2</xref>
          <xref ref-type="aff" rid="aff3">3</xref>
          <xref ref-type="aff" rid="aff4">4</xref>
          <xref ref-type="aff" rid="aff5">5</xref>
          <xref ref-type="aff" rid="aff6">6</xref>
          <xref ref-type="aff" rid="aff7">7</xref>
          <xref ref-type="aff" rid="aff8">8</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Proceedings of the XVII International Conference «Data Analytics and Management in Data Intensive Domains» (DAMDID/RCDL'2015)</institution>
          ,
          <addr-line>Obninsk</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>University of Texas Arlington</institution>
          ,
          <addr-line>TX</addr-line>
          ,
          <country country="US">U.S.A. 㼐㼑㼠㻬㼕㼔㼟㼡㼍㻚㼗</country>
        </aff>
        <aff id="aff2">
          <label>2</label>
          <institution>Alexandre Vaniachine Argonne National Laboratory</institution>
          ,
          <addr-line>Argonne, IL</addr-line>
          ,
          <country country="US">U.S.A</country>
        </aff>
        <aff id="aff3">
          <label>3</label>
          <institution>Alexei Klimentov Big Data Laboratory, National Research Centre "Kurchatov Institute", Moscow, Russia Brookhaven National Laboratory</institution>
          ,
          <addr-line>Brookhaven, NY</addr-line>
          ,
          <country country="US">U.S.A. 㼛㼓㼢㼗㻬㼎㼚㼘㻚㼍</country>
        </aff>
        <aff id="aff4">
          <label>4</label>
          <institution>David South Deutsches Elektronen-Synchrotron</institution>
          ,
          <addr-line>Hamburg</addr-line>
          ,
          <country country="DE">Germany</country>
        </aff>
        <aff id="aff5">
          <label>5</label>
          <institution>Dmitry Golubkov Big Data Laboratory, National Research Centre "Kurchatov Institute", Moscow, Russia Institute for High Energy Physics</institution>
          ,
          <addr-line>Protvino</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
        <aff id="aff6">
          <label>6</label>
          <institution>Jose Garcia Navarro IFIC, Universidad de Valencia</institution>
          ,
          <addr-line>Valencia</addr-line>
          ,
          <country country="ES">Spain</country>
        </aff>
        <aff id="aff7">
          <label>7</label>
          <institution>Mikhail Borodin Big Data Laboratory, National Research Centre "Kurchatov Institute", Moscow, Russia National Research Nuclear University "MEPhI"</institution>
          ,
          <addr-line>Moscow</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
        <aff id="aff8">
          <label>8</label>
          <institution>Tadashi Maeno Brookhaven National Laboratory</institution>
          ,
          <addr-line>Brookhaven, NY</addr-line>
          ,
          <country country="US">U.S.A</country>
        </aff>
      </contrib-group>
      <fpage>157</fpage>
      <lpage>164</lpage>
      <abstract>
        <p />
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>-</title>
      <p>The physics goals of the next Large Hadron
Collider run include high precision tests of the
Standard Model and searches for new physics.
These goals require detailed comparison of data
with computational models simulating the
expected data behavior. To highlight the role
which modeling and simulation plays in future
scientific discovery, we report on use cases and
experience with a unified system built to process
both real and simulated data of growing volume
and variety.</p>
    </sec>
    <sec id="sec-2">
      <title>1 Introduction</title>
      <p>
        In 2015 the Large Hadron Collider will open new
“Gates of Nature” by reaching instantaneous
luminosities exceeding 2·1034 cm-2s-1 and center of
mass energies of 13 TeV. The physics goals of the
ATLAS experiment [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ] include searches for physics
beyond the Standard Model and high precision Higgs
sector studies. These goals require detailed comparison
of the expected physics and detector behavior with data.
      </p>
      <p>This comparison is missed in the naïve (“let the data
speak for themselves”) approach to Big Data
processing, which omits modeling and simulation. In
contrast to the naïve approach, in our case the
comparison requires a large number of computational</p>
      <sec id="sec-2-1">
        <title>ATLAS Preliminary!</title>
        <p>2010$
2011$
2012$
2013$
2014$
models simulating the expected behavior. In order to
simulate the diversity of LHC physics, ATLAS
produces more than 35 000 samples of simulated data
per year. The variety of our simulated data adds value to
the unified system for Big Data processing.</p>
        <p>The LHC experiments employ the computational
infrastructure of the Worldwide LHC Computing Grid
(WLCG) [2]. The academic distributed computing
environment of WLCG builds on the ideas proposed by
Foster and Kesselman [3]. ATLAS leads in the WLCG
usage in the number of data processing jobs and
processed data volume. ATLAS manages more than
160 petabytes of data on more than hundred
computational sites.</p>
        <p>The central ATLAS production system (here
referred to as ProdSys1) was designed and deployed
more than nine years ago to address the needs of
simulations and real data processing. Since the start of
its operation, ProdSys1 proved itself as a valuable tool
for processing real and simulated data on the Grid and
became one of the enabling factors for the
Collaboration.</p>
        <p>ATLAS experience gained in managing simulations
and data processing on an ever-increasing scale and
handling scientific workflow requests of growing
complexity led to a realization that ProdSys1 has to be
significantly enhanced and updated. In this paper we
highlight the production system techniques validated
through practice, describe representative use cases
handled by the production system and its upgrade – the
ProdSys2.</p>
      </sec>
    </sec>
    <sec id="sec-3">
      <title>2 Experience with Techniques</title>
      <p>For data processing The ATLAS experiment adopted
the data transformation technique, where software
applications transform the input datasets of one data
type (described in Appendix) into the output datasets of
another data type. Figure 1 shows that the data
transformation technique experienced an exponential
growth rate in the number of new data transformations
handled by the production system.</p>
      <p>The ATLAS production system deals with datasets,
not individual files. Similarly a task (comprised of
many data processing jobs) has become a unit of the
workflow in ATLAS data processing. The ATLAS
production system therefore serves an important role as
a top layer of abstraction responsible for defining jobs
in a scalable and automated manner for unified
processing of the real and simulated data. Jobs are
defined in large collections (tasks), and are formulated
to fulfil "task requests". A task is defined based on a
data transformation request, and it has a number of
attributes, set in accordance with that request, while
requests are essentially dictionaries of parameters fed
into the system by the scientist using a Web interface or
other tools.</p>
      <p>The variety of our data and data transformations
places a significant burden on scientists to configure
and manage the large number of parameters and
options. The laborious process of steering the data
transformations by providing dictionaries of parameters
is manual. The error-prone manual process does not
scale to the LHC challenges. To reduce human errors
and automate the process of defining millions of jobs,
the production system manages configuration
parameters and guarantees reproducibility of results.
The production system management of the institutional
knowledge of the process of tuning and setting up data
processing tasks resulted in major gains in efficiency
and productivity.</p>
      <p>The next step in the lifecycle of the task is its
automatic translation into a number of individual job
definitions, which sometimes is quite large (tens of
thousands). In ProdSys1, individual job definitions are
set based on the parent task parameters and remain
static for the duration of the whole task execution. Data
pertaining to requests, tasks and jobs are persisted in the
Oracle RDBMS. Thus, ProdSys1 operation can be
described as a sequence of transitions, starting with
recording requests, and formulating tasks by processing
those requests and then creating a static list of job
definitions for each task. Figure 2 shows that the
production system experienced double exponential
growth of the number of task requests.</p>
      <p>Leveraging the underlying job management system
PanDA described in Ref. [4], the production system
steers ATLAS data processing applications on more
than the many hundred thousands of CPU-cores
provided by the WLCG. The individual data processing
tasks are organized into workflows. During data
processing, the system monitors site performance and
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      <sec id="sec-3-1">
        <title>ATLAS Preliminary</title>
        <p>10#
supports dynamic sharing minimizing the workflow
duration. Also, the production system enhances the
resilience by managing failures in tasks and/or jobs,
bulk job submission depending on success of the scout
jobs, automatic e-mail notification, etc.</p>
        <p>As the production workload increased in volume
and complexity (the ATLAS production tasks count is
above 1.6 million), the ATLAS experiment scaled up its
data processing capabilities by upgrading the
production system that unifies processing of the real
and simulated data. To reduce the costs, the production
system core remained shared by all use cases, despite
the differences in their data processing requirements
described in the next section.</p>
      </sec>
    </sec>
    <sec id="sec-4">
      <title>3 Use Cases and Results</title>
      <p>failures at the expense of CPU time used by the failed
jobs. This technique has not presented a problem, as the
fraction of CPU-time used for the recovery of lost data
varied from three to six percent, while reducing data
losses below the 10-8 level. The achieved level enables
recovery of the lost data on a case-by-case basis.</p>
      <sec id="sec-4-1">
        <title>3.1 Trigger Data Processing</title>
        <p>The first step to new physics discoveries and high
precision studies of rare events is the rejection of the
benign events with “known” processes. The multi-tier
trigger system reduces the exascale data flood to a
petascale level by rejecting data from most of LHC
collision events. In 2015, the ATLAS experiment will
have a two-tier trigger system:
1. The hardware-based Level 1 trigger.
2. The software-based High-Level Trigger</p>
        <p>designed by the ATLAS Collaboration [5].</p>
        <p>The trigger data processing happens one step before
the recording of “raw” data from the ATLAS detector.</p>
        <p>Thus, any inefficiencies or mistakes may lead to
unrecoverable loss of real data. To eliminate such
losses, the dedicated trigger data processing workflow
is employed to validate trigger software and other
critical trigger changes during data taking. The trigger
data processing is the main tool for commissioning the
trigger for data taking. The challenge here is to achieve
the fast turnaround, while avoiding data loss. The
Trigger Data
Real Data
Simulated Data</p>
        <p>Frequency</p>
        <p>Weekly</p>
        <p>Yearly
Quarterly</p>
        <p>Workflow</p>
        <p>Length</p>
        <p>Short
Medium</p>
        <p>Long</p>
        <p>Number of Tasks</p>
        <p>Tasks Duration</p>
        <p>Data Loss</p>
        <p>Several
Hundreds
Thousands</p>
        <p>Day
Weeks
Months
no
no
yes
Fig. 3. Data processing workflow for the real data. Arrows are labeled with data transformation applications;
boxes are labeled with various data types produced (see Appendix for data types descriptions).</p>
        <p>Hard
sca ering
events
Low-pT
minimum
bias events
High-pT
Minimum
bias events</p>
        <p>Event
Genera on</p>
        <p>Event
Genera on</p>
        <p>Event
Genera on</p>
        <p>Detector
Simula on
Detector
Simula on
Detector
Simula on</p>
        <p>Digi za on
with pileup
events</p>
        <p>Trigger
Simula on</p>
        <p>Reconstruc on</p>
        <p>Analysis
Fig, 4. ATLAS simulations workflow is composed of many steps. Several initial steps are repeated for the
hardscattering events and the minimum bias events (simulated in two complementary samples).
experience with ProdSys1 shows that resubmission of
the failed jobs delays the task completion. The
resubmission technique has to be improved to meet the
trigger data processing requirements.</p>
      </sec>
      <sec id="sec-4-2">
        <title>3.2 Real Data Processing</title>
        <p>The “raw” data from the ATLAS detector are processed
to produce the reconstructed data for physics analysis.
During reconstruction ATLAS applications process raw
detector data to identify and reconstruct physics objects
such as leptons. Figure 3 shows the data processing
flow used in reconstruction.</p>
        <p>The ATLAS collaboration completed four petascale
data processing campaigns on the Grid, with up to 2 PB
of real data being processed every year. Table 2 lists
parameters for the ATLAS yearly data processing
campaigns. (In 2013 reprocessing, 2.2 PB of input data
were used for selecting about 15% of all events for
reconstruction, thus reducing CPU resources vs. the
2012 reprocessing.)</p>
        <p>Thanks to the quality of the ATLAS software and
improvements in data processing workflow, in the 2011
data reprocessing only two collision events (out of 0.9
109 events total) could not be reconstructed due to
subtle software bugs. Correcting these bugs allowed the
Campaign
year
remaining events to be processed in a dedicated data
recovery step.</p>
        <p>In rare cases, the data corruption during job
execution has been missed by the software or
computing framework. This is called silent data
corruption, which is detected later during data analysis.
For example, the silent data corruption was detected in
six events from the reprocessed 2010 data and in five
adjacent events from the 2011 reprocessed data.
Lowering the event losses below the 10-8 level enables
recovery of the lost data on a case-by-case basis.</p>
      </sec>
      <sec id="sec-4-3">
        <title>3.3 Simulated Data Processing</title>
        <p>The computational resources required to process the
simulated data dominate the overall resource usage. The
data processing campaigns for the simulated data
correspond to the data taking periods of the real data.
The LHC data taking periods of the same conditions are
characterized by the same center-of-mass energy,
instantaneous luminosity, detector configuration, etc.
Table 3 lists the major data processing campaigns for
the simulated data.</p>
        <p>The LHC instantaneous luminosities result in the
presence of a large number of simultaneous collisions in
the same event, overlapping the hard scattering event of
interest. The presence of these additional minimum bias
events is usually called “pileup”. To provide realistic
simulation of these conditions, the data processing
workflow for simulated data is composed of many steps
(Figure 4): generate or configure hard-processes,
hadronize signal and minimum-bias (pileup) events,
simulate energy deposition in the ATLAS detector,
digitize electronics response, simulate triggers,
reconstruct data, transform the reconstructed data into
data types for physics analysis, etc. The intermediate
outputs are merged and/or filtered as necessary to
optimize the chain.</p>
        <p>An example of a more complex workflow used to
simulate the ATLAS trigger using dedicated hardware
for fast tracking (FTK) designed by the ATLAS
Collaboration [6] is shown on Figure 5, where to keep
the computational resources for the FTK simulation
below practical limits, every event is split into 256
sub-regions [7]. In the three-step workflow, each event
is processed by 64 jobs; each job simulates tracks in
four FTK sub-regions one after another. The sub-region
merging is done in two steps: producing whole regions,
then whole events in the NTUP_FTK files. The final
step uses FTK tracks in trigger simulations producing
the reconstructed data in DESD_FTK files or adds FTK
tracks to the simulated events in the RDO_FTK files
(see Appendix for the data types descriptions).</p>
        <p>The FTK workflow demonstrates the production
system workflow with sub-events processing (vs.
traditional processing of the whole events). We expect
that next-generation processor technologies (such as
many-core) will increase the number of workflows with
fine-grained processing.</p>
        <p>Validating the Big Data processing techniques, four
different sub-campaigns of the mc11 campaign
implemented the pileup conditions, detector conditions
and geometry increasingly closer to those in real data.
2: Each FTK input
event is processed by
64 jobs - one job per
tower region
2a: For each of the
64 regions, simulate FTK
tracks in each of the four
sub-regions per region
1: Skim silicon
data from each
event into one
FTK input event</p>
        <p>RDO</p>
        <p>NTUP_
FTKIP</p>
        <p>RDO</p>
        <p>2b: Merge all
four sub-regions
for every tower</p>
        <p>region
3a: Merge all
64 tower regions
into whole event
reg0
…
reg63
RDO</p>
        <p>RDO
NTUP_FTK</p>
        <p>NTUP_FTK
3b: Reconstruct
or merge each</p>
        <p>event with
corresponding
merged FTK tracks</p>
        <p>DESD_FTK
RDO_FTK
During the mc12 campaign, the majority of the events
was simulated in the sub-campaign mc12b. Later, the
mc12c sub-campaign implemented an improved
detector geometry description. The goal of the mc14
campaign was to prepare for the 2015 data taking. The 8
TeV events were processed with improved and updated
simulation, digitization and reconstruction software
while using the same conditions as in the mc12
campaign. The 13 TeV campaign had the center of mass
energy expected for the 2015 data taking with estimated
pileup and detector conditions. The mc14 campaign
used the new ATLAS Integrated Simulations
Framework described in Ref. [8], with multicore
processing becoming the default for major simulated
data processing steps: simulation, digitization and
reconstruction.</p>
      </sec>
    </sec>
    <sec id="sec-5">
      <title>4 Multilayer Data Processing System</title>
      <p>The LHC shutdown provided an opportunity for
upgrading the production system, making
implementations more maintainable by separating the
core concerns: the system logic layer and the
presentation layer. Figure 6 shows that on top, the
upgraded Task Request interface encapsulates the
concise and transparent presentation layer for users,
while the lower Task Definition layer implements the
core data processing logic that empowers scientists with
templated workflow definitions through the Database
Engine for Tasks (DEfT). At the layer below, the Job
Execution and Definition Interface (JEDI) is integrated
with the PanDA layer to provide dynamic job definition
tailored to the sites capabilities. The two middle layers
communicate via customized JSON protocol. The
multi-layer design provided clean separation of the
PanDA-specific JEDI layer defining the jobs and the
generic workflow abstraction confined to the DEfT
layer.</p>
      <sec id="sec-5-1">
        <title>4.1 Workflow Abstraction</title>
        <p>The ProdSys1 experience made clear that the new level
of abstraction – the workflow – is necessary to scale up
the system in support of the growing number of tasks
and data transformations. The workflow is a group of
interdependent tasks, where dependencies exist in the
form of the input/output datasets. Such would be the
case with a “chain” type simulations workflow (Figure
4), where the data goes through transformations with
possible other steps like merging interspersed in
between.</p>
        <p>DEfT is the service that implements the workflow
abstraction in the upgraded production system. Due to
relative autonomy of DEfT, i.e. it’s agnostic approach
to the computational resources used (which are in the
scope of the JEDI component), it is appropriate to
describe it as a state machine, in which the states of the
workflow components undergo a series of transitions
based on certain predefined rules and external events,
such completion of a job managed by JEDI. By itself,
DEfT is not a workload management or resource
provisioning system. It is a higher-level abstraction
layer encapsulating institutional knowledge that allows
scientists to concentrate on the design, monitoring and
effective management of production workflows.</p>
      </sec>
      <sec id="sec-5-2">
        <title>4.2 Job Definition Improvements</title>
        <p>The ProdSys1 experience demonstrated that it is
difficult to generalize the procedure of job definition
since the method used to define jobs depends on the
task type. For improved maintainability and flexibility
JEDI has a pluggable structure so that a plug-in defines
jobs for each use case.</p>
        <p>Dynamic job definition means that the job is defined
at some point after the creation of its parent task, and
taking into account operating conditions that were not
known at the task inception. This is in contrast to a
static definition of the job that happens immediately
once the task is created. There are advantages realized
once there is a capability to define jobs dynamically,
based on the actual resources and other conditions
present once the task moves into the execution stage.
For example, the late binding takes advantage of
defining small jobs for the sites with limited capabilities
(slow CPU, low disk, network, etc.) or defining
extremely large jobs for processing on the HPC facility
with hundred thousand CPU-cores. Another advantage
is resubmission of the long failed job redefined as
several short jobs. This capability avoids delays in task
completion for use cases such as trigger data processing
described in Section 3.1.</p>
        <p>We further upgraded the production system to
improve the performance and accommodate a growing
number of new requirements and use cases. Figure 7
shows that the upgraded system is deployed in
production supporting complex workflows with tasks
processing simulated and real data for future scientific
Tasks Requests Layer: UI</p>
        <p>Task Defini on Layer: DEfT</p>
        <p>Job Defini on Layer: JEDI</p>
        <p>Job Execu on Layer: PanDA</p>
      </sec>
    </sec>
    <sec id="sec-6">
      <title>Acknowledgements</title>
      <p>discoveries. [2] I. Bird, Computing for the Large Hadron Collider.
Annu. Rev. Nucl. Part. S. 2011, 61: 99.
5 Conclusion [3] The Grid: Blueprint for a New Computing
Infrastructure. Kesselman C and Foster I, editors.</p>
      <p>Over the last several years, the ATLAS production San Francisco: Morgan Kaufmann. 1999.
system unified a diverse range of workflows and special
use cases including processing of the real and the [4] T. Maeno et al. Evolution of the ATLAS PanDA
simulated data at large scales. The ATLAS production production and distributed analysis system.
system fully satisfies the Big Data processing J. Phys.: Conf. Ser. 2012, 396:032071.
requirements of the ATLAS experiment through the [5] The ATLAS Collaboration. Technical Design
unified approach for real data processing and Report for the Phase-I Upgrade of the ATLAS
simulations as well as the mixture of both. This TDAQ System. LHCC Report
CERN-LHCC-2013technique enabled to address a much wider range of 018, Geneva: CERN, 2013.
physics analyses, with sufficiently good accuracy. The [6] The ATLAS Collaboration. ATLAS Fast TracKer
unified production system does not limit our ability to (FTK) Technical Design Report. LHCC Report
process real and simulated data. In addition, detailed CERN-LHCC-2013-007, ATLAS-TDR-021,
physics studies established that the simulated data are of Geneva: CERN, 2013.
higher accuracy and variety compared to previous [7] J. Adelman et al. ATLAS FTK challenge:
generations of experiments, describing the detector simulation of a billion-fold hardware
behavior quite well in most analyses. The unified parallelism. ATLAS Note
ATL-DAQ-PROC-2014capabilities for real and simulated data processing 030, Geneva: CERN, 2014.
significantly enhanced ATLAS physics output, and they [8] C. Debenedetti on behalf of the ATLAS
motivated production of higher than foreseen simulated Collaboration. Concepts for fast large scale Monte
data volumes. Carlo production for the ATLAS experiment.
J. Phys.: Conf. Ser. 2014, 513: 022006.</p>
      <p>We wish to thank all our colleagues who contributed
to ATLAS Big Data processing activities. This work
was funded in part by the U. S. Department of Energy,
Office of Science, High Energy Physics and ASCR
Contract No. DE-AC02-98CH10886 and Contract No.</p>
      <p>DE-AC02-06CH11357. NRC KI team work was funded
by the Russian Ministry of Science and Education under
Contract 14.Z50.31.0024.</p>
    </sec>
    <sec id="sec-7">
      <title>Appendix</title>
      <p>RAW
ESD
AOD
DPD
RDO
DESD
DAOD
NTUP
HIST</p>
      <p>Raw Data
Event Summary</p>
      <p>Data
Analysis Object</p>
      <p>Data
Derived Physics</p>
      <p>Data
Raw Data Object</p>
      <p>Derived Event
Summary Data</p>
      <p>Derived
Analysis Object</p>
      <p>Data</p>
      <p>N-tuples
Histograms
Description</p>
      <p>Events selected after the High Level Trigger.</p>
      <p>Events reconstructed from RAW that contain sufficient
information to allow rapid tuning of reconstruction
algorithms and detector calibrations.</p>
      <p>Contains a summary of the reconstructed event contains
sufficient information for common physics analyses.</p>
      <p>AOD specific to one or a few analysis groups
Representation of the RAW data format used predominantly
in simulation.</p>
      <p>Data derived from the ESD where reduction is used to select
targeted events and store only the necessary information.</p>
      <p>Data derived from the AOD where reduction is used to
select targeted events and store only the necessary
information.</p>
      <p>Contains summary n-tuples for the data processed.
Contains summary histograms for the data processed</p>
    </sec>
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