=Paper=
{{Paper
|id=Vol-1747/IT201_ICBO2016
|storemode=property
|title=Environmental Semantics for Sustainable Development in an Interconnected Biosphere
|pdfUrl=https://ceur-ws.org/Vol-1747/IT201_ICBO2016.pdf
|volume=Vol-1747
|authors=Pier Luigi Buttigieg,Mark Jensen,Ramona Walls,Christopher Mungall
|dblpUrl=https://dblp.org/rec/conf/icbo/ButtigiegJWM16
}}
==Environmental Semantics for Sustainable Development in an Interconnected Biosphere ==
Environmental semantics for sustainable development in an interconnected biosphere Pier Luigi BUTTIGIEG Ramona L WALLS Alfred-Wegener-Institute, Helmholtz-Zentrum für Polar- und CyVerse Meeresforschung University of Arizona Bremerhaven, Germany Tucson, AZ, USA pbuttigi@mpi-bremen.de rwalls@cyverse.org Mark JENSEN Christopher J MUNGALL University at Buffalo Lawrence Berkeley National Laboratories Buffalo, NY, USA Berkeley, CA, USA mpjensen@buffalo.edu cjmungall@lbl.gov Please Note: This is an extended abstract for a 15 domain, the best practices of the OBO Foundry and Library minute talk during the plenary session. [4] are being leveraged to create the Sustainable Development Goals Interface Ontology (SDGIO; [5]), in collaboration with the United Nations Environment Programme (UNEP). In this Abstract— Development unavoidably impacts the ecosystems talk, we will discuss our efforts to represent environmental constituting Earth’s biosphere, often producing complex outcomes entities in SDGIO through coordination with the Environment across a range of spatial and temporal scales. The Ontology (ENVO; [6]). interconnectivity of global ecosystems and their varied responses to disturbance necessitate great caution when using or encountering terms such as “sustainable” and “sustainability”. The Environment Ontology (ENVO; II. REPRESENTING THE ENVIRONMENTAL ASPECT OF www.environmentontology.org) is coordinating with the SUSTAINABLE DEVELOPMENT IN AN ANTHROPISED BIOSPHERE Sustainable Development Goals Interface Ontology (SDGIO) to Earth’s anthropised biosphere [7] sets the stage for the improve semantic representation of environments in the context of global development. In this talk, we will present progress realisation of the SDGs. Accounting for and responsibly towards this goal, emphasising the potential of ecosystem managing the integrity of the planet’s constituent ecosystems semantics in bridging and seeding new domain ontologies. is central to the global development agenda for 2030 [3]. Clearly representing environmental entities – which are often Keywords—sustainable development; environment; biosphere; ontology; semantics only loosely defined – is key to revealing the interconnectivity of development and conservation activities with undirected or I. INTRODUCTION emergent ecosystem processes. With improved environmental semantics, researchers may better coordinate data and The United Nations Sustainable Development Goals (SDGs; information about the processes through which natural, semi- [1], [2]) specify a transformative global agenda for natural, and strongly anthropised environmental systems harmonising anthropocentric development and the regenerate the inputs of and/or remediate and recycle the preservation of ecosystem integrity across multiple scales. In outputs of human activity. These dynamics, considered at addressing some of the greatest challenges of our time – different spatiotemporal scales, are at the centre of including eradicating diverse forms of poverty, hunger, and understanding whether or not a given activity is, in fact, lack of access to basic services – the agenda articulates the sustainable. The Environment Ontology (ENVO), which need to prevent degradation of the ecosystems which support represents a broad range of environmental systems, has been human societies and constitute humanity’s natural heritage adopted and imported into SDGIO to address these issues. Its [3]. Measuring progress towards the SDGs is complicated by content is being extended to accommodate entities referenced ambiguity in the terminology used to refer to entities of by the SDGs (Buttigieg et al., in review) and to better interest in local, national, regional, and international contexts represent entities such as “ecosystem services” and “natural and the difficulties in revealing their interconnectivity. Hence, capital”. As a motivating example, we will present the work has begun to create an ontology which will assist challenges of representing the preservation of ecosystem multiple stakeholders in more clearly associating their efforts, services on a parcel of land: issues with spatial and temporal data, and knowledge to the wide range of entities participating boundaries, classification of environment types, and human- in the SDG process. Following the fruitful experience of environment interactions will be explored. ontologists operating in the biomedical and biological III. THE ENVIRONMENT ONTOLOGY AS A SEMANTIC STAGING ENVO and SDGIO is creating a semantic layer capable of GROUND supporting the implementation of the Sustainable In addition to handling ecosystems, the inclusive nature of Development Agenda. In the near future, we hope to expand environmental semantics offers a means to accelerate the our sphere of collaboration with other existing or planned development of semantic resources for sustainable ontologies and implementation partners to represent their development. Representing the large collection of domains work and enhance their informatics resources. referenced by the SDGs is a formidable task, which requires REFERENCES the creation of more ontologies in domains such as urban infrastructure and trade networks. However, creating new [1] United Nations Department of Economic and Social Affairs, ontologies without sufficient community engagement and “Transitioning from the MDGs to the SDGs : accountability for the dedicated teams of domain experts and developers would be post-2015 era,” no. ST/ESA/2015/CDP/25. New York, New York, premature. Nonetheless, implementation partners have USA, 2015. pressing needs and are often unable to wait for such a [2] United Nations, “Transforming our world: the 2030 agenda for sustainable development.” p. A/RES/70/1, 2015. consortium to be assembled. Thus, in the interim, the broad [3] UNEP, Embedding the Environment in Sustainable Development scope of environmental semantics may readily serve as a Goals. UNEP Post-2015 Discussion Paper 1, no. July 2013. ‘staging ground’ for nascent ontologies. As environmental Nairobi: United Nations Environment Programme (UNEP), 2013. systems can include most entities as parts, ENVO has been [4] B. Smith, M. Ashburner, C. Rosse, J. Bard, W. Bug, W. Ceusters, L. J. Goldberg, K. Eilbeck, A. Ireland, C. J. Mungall, N. Leontis, P. used to represent entities from stars to zebra milk and Rocca-Serra, A. Ruttenberg, S.-A. Sansone, R. H. Scheuermann, N. umbrellas. Once a more focused ontology has been Shah, P. L. Whetzel, and S. Lewis, “The OBO Foundry: coordinated sufficiently developed and stabilised, ENVO will import its evolution of ontologies to support biomedical data integration.,” Nat classes (as needed) and obsolete any redundant content in aid Biotechnol, vol. 25, no. 11, pp. 1251–5, Nov. 2007. [5] “The Sustainable Development Goals Interface Ontology (SDGIO) of coordinated development. Such an approach is being Code Repository.” [Online]. Available: https://github.com/SDG- implemented with classes pertaining to food products and InterfaceOntology/sdgio. agronomic entities (these proceedings), which will be [6] P. L. Buttigieg, N. Morrison, B. Smith, C. J. Mungall, and S. E. imported into SDGIO. Lewis, “The environment ontology: contextualising biological and biomedical entities.,” J Biomed Semant, vol. 4, no. 1, p. 43, Jan. 2013. [7] S. L. Lewis and M. A. Maslin, “Defining the Anthropocene,” IV. OUTLOOK AND CONCLUSIONS Nature, vol. 519, no. 7542, pp. 171–180, Mar. 2015. Environmental considerations are central to sustainable development, and coordination between ontologies such as