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  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>Variable binding through assemblies in spiking neural networks</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Robert Legenstein</string-name>
          <email>legi@igi.tugraz.at</email>
          <xref ref-type="aff" rid="aff2">2</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Christos H. Papadimitriou</string-name>
          <email>christos@cs.berkeley.edu</email>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Santosh Vempala</string-name>
          <email>vempala@gatech.edu</email>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Wolfgang Maass</string-name>
          <email>maass@igi.tugraz.at</email>
          <xref ref-type="aff" rid="aff2">2</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>College of Computing, Georgia Tech</institution>
          ,
          <addr-line>Atlanta, GA 30308</addr-line>
          ,
          <country country="US">USA</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>EECS</institution>
          ,
          <addr-line>UC Berkeley, CA 94720</addr-line>
          ,
          <country country="US">USA</country>
        </aff>
        <aff id="aff2">
          <label>2</label>
          <institution>Institute for Theoretical Computer Science, Graz University of Technology</institution>
          ,
          <addr-line>A-8010 Graz</addr-line>
          ,
          <country country="AT">Austria</country>
        </aff>
      </contrib-group>
      <abstract>
        <p>We propose a model for the binding of variables to concrete fillers in the human brain. The model is based on recent experimental data about corresponding neural processes in humans. First, electrode recordings from the human brain suggest that concepts are represented in the medial temporal lobe (MTL) through sparse sets of neurons (assemblies). Second, fMRI recordings from the human brain suggest that specific subregions of the temporal cortex are dedicated to the representation of specific roles (e.g., subject or object) of concepts in a sentence or visually presented episode. We propose that quickly recruited assemblies of neurons in these subregions act as pointers to previously created assemblies that represent concepts. As a proof of principle, we performed computer simulations of a spiking neural network model that implemented the proposed paradigm for binding through assembly pointers. We show that the model supports basic operations of brain computations, such as structured recall and copying of information.</p>
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>Introduction</title>
      <p>
        Numerous electrode recordings from the human brain (see [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ] for a review) suggest that concepts
are represented through sparse sets of neurons that fire (more or less) whenever the corresponding
concept is activated. These data confirm earlier hypotheses and models about the representation of
tokens of cognitive computations through assemblies of neurons [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ]. More recent data [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ] suggests
that assemblies should not be seen as invariant entities, but as fluent coalitions of neurons whose
synaptic interconnections can be strengthened very fast, even in response to a single experience. This
data also suggests that these processes on the synaptic level underlie the formation of associations.
We propose that assemblies of neurons are also instrumental for creating a transient or longer lasting
binding of a variable to a filler. For example, they could bind a variable that represents a thematic
role (e.g., agent or patient in an episode) to a word or concept. Information about the neural
representation of semantic roles is provided through recent fMRI data, where specific subregions in the
temporal cortex were shown to respond to specific semantic (thematic) roles of individuals in an
episode that was communicated through a sentence [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ] or a movie [
        <xref ref-type="bibr" rid="ref5">5</xref>
        ].
      </p>
      <p>Copyright © 2016 for this paper by its authors. Copying permitted for private and academic purposes.</p>
      <p>
        Here we do not assume that semantic roles are represented by fixed assemblies of neurons. Such a
fixed assembly would in general not have sufficient direct synaptic connectivity to the virtually
unlimited repertoire of words or concepts, each represented through assemblies in other brain regions,
that could acquire this semantic role in an episode. To achieve such large potential connectivity, the
size of this fixed assembly would have to be so large that its activation would not be consistent with
generic sparse firing activity in each brain region. Rather, we propose that the specific subregions
of the temporal cortex that were shown to be activated differentially in dependence of the specific
semantic role of a concept serve as large pools of neurons (we will refer to them as neural spaces). In
neural spaces, sparse assemblies can quickly be recruited from the subset of neurons that happen to
have direct synaptic connections to the assemblies for the corresponding concepts involved
(assembly pointers). We propose that this model can reconcile functional needs, such as being able to recall
the concept from its recent thematic role, with data on the inherently sparse connectivity between
brain areas [
        <xref ref-type="bibr" rid="ref6">6</xref>
        ]. One can also view this model as a direct extrapolation of data on the formation of
associations between concepts from [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ] to associations between thematic roles (i.e., variables) and
concepts.
      </p>
      <p>
        We propose that one well-known neurophysiological mechanism is essential for the control of this
binding process: disinhibition. At least two different ways how brain areas can be selectively
disinhibited have been proposed on the basis of experimental data [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. One is neuromodulatory control
(especially cholinergic), see [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ]. Another one is disinhibition via the activation of VIP cells, i.e., of
inhibitory neurons that primarily target other types of inhibitory neurons [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ]. Firing of VIP cells is
apparently often caused by top-down inputs (they are especially frequent in layer 1, where top-down
and lateral distal inputs arrive). Their activation is conjectured to enable neural firing and plasticity
within specific patches of the brain through disinhibition, see e.g. [
        <xref ref-type="bibr" rid="ref10 ref11 ref12 ref7 ref8">7, 8, 10, 11, 12</xref>
        ]. We propose that
disinhibition plays a central role for neural computation and learning by controlling operations on
assembly pointers.
      </p>
      <p>
        In this article, we briefly describe the proposed model of assembly pointers for variable binding and
outline a spiking neural network that implements this model. A more detailed discussion for the
model can be found in [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ].
2
      </p>
    </sec>
    <sec id="sec-2">
      <title>Results</title>
      <p>
        Recent experimental data indicates that neural activity patterns in cortex can be characterized in first
approximation as spontaneous and stimulus-evoked switching between the activations of different
(but somewhat overlapping) subsets of neurons (see e.g. [
        <xref ref-type="bibr" rid="ref14 ref15 ref16">14, 15, 16</xref>
        ]), often referred to as assemblies
of neurons. We therefore represent a specific content (a word or a concept) in our model by a specific
assembly of neurons in a content space C.
      </p>
      <p>
        Our model for the binding of a variable that represents a syntactic role (agent, verb, patient) to a
concrete word (referred to more abstractly as "content" in our model) is based on the results and
hypotheses of [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ]. We refer to the particular region or set of neurons that is reserved for a variable v
as a neural space Nv for variable v. Thus each such neural space Nv can be viewed as functioning
like a register in a computer in the terminology of [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ]. But in contrast to a computer, this "register"
is not used for storing content in it. Rather, assemblies in this register store "handles" or "pointers"
to assemblies that store content information in the separate content space C.
      </p>
      <p>
        In addition our model takes into account that neurons typically do not fire just because they receive
sufficiently strong excitatory input. Experimental data suggest that neurons are typically prevented
from firing by an "inhibitory lock", that balances or even dominates excitatory input [
        <xref ref-type="bibr" rid="ref17">17</xref>
        ]. Thus a
generic pyramidal cell is likely to fire because two events take place: its inhibitory lock is temporarily
lifted ("disinhibition") and its excitatory input is sufficiently strong. Such disinhibition is apparently
often caused by top-down inputs. We propose that orchestrated top-down disinhibition of neural
spaces controls the formation of assembly pointers as well as the recall of content from assembly
pointers and other cognitive operations.
      </p>
      <p>
        We implemented this network structure with stochastically spiking neurons. The network consisted
of a content space C and a neural space Nv for some variable v that each contained 1000 recurrently
connected excitatory neurons (connection probability 0.1). To ensure sparse activity, lateral
inhibition was implemented in a symbolic manner in each of the neural spaces through an inhibitory
current that depended on the recent firing rate of neurons in the space. Disinhibition was modeled
through a multiplicative effect of an inhibitory input on the membrane potential of neurons.
Reciprocal connections between C and Nv were introduced randomly with a connection probability of 0.1.
Neurons in the content space received in addition connections from 200 input neurons. All synapses
between excitatory neurons in the circuit were subject to spike-timing dependent plasticity (STDP).
First, five assemblies were induced in content space C by repeated presentation of 5 simple rate
patterns P1, . . . , P5 that represented concepts or words at the input. Due to these pattern presentations,
an assembly C(Pi) emerged in content space for each of the patterns Pi (assembly sizes between
81 and 86 neurons) that showed robust firing activity whenever the corresponding pattern was
presented as input. STDP of recurrent connections led to a strengthening of these synapses within each
assembly, while synapses between assemblies remained weak (see [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ] for details).
According to our model for variable binding, disinhibition enables the creation of an assembly
pointer in some neural space Nv to the currently active assembly in the content space. Such
disinhibition of a neural space Nv allows that some of neurons in it can fire, especially those that
receive sufficiently strong excitatory input from a currently active assembly in the content space.
Furthermore, in line with previously cited experimental reports we assume that this allowed firing of
neurons in the neural space also enables plasticity of these neurons and synapses that are connected
to it. To validate this hypothesis, we simulated disinhibition of the neural space Nv while input to
content space C excited an assembly there. We found that STDP in the synapses that connect the
content space C and the neural space Nv led to the stable emergence of an assembly in Nv within a
second. Further, plasticity at recurrent synapses in Nv induced a strengthening of recurrent
connections within assemblies there. Hence, disinhibition led to the rapid and stable creation of an assembly
in the neural space, i.e., an assembly pointer. We denote such creation of an assembly pointer in a
neural space Nv for a specific variable v to content P encoded in content space by CREATE(v, P ).
Our model for variable binding based on assembly pointers further assumes that strengthened
synaptic connections between assemblies in a neural space Nv and content space C enable the recall
RECALL(v) of the variables’ content, i.e., the activation of the assembly for content P in
content space that was active at the most recent CREATE(v, P ) operation (e.g., representing the word
“truck”). It has been shown that the excitability of pyramidal cells can be changed in a very fast but
transient manner through fast depression of GABA-ergic synapses onto pyramidal cells [
        <xref ref-type="bibr" rid="ref18">18</xref>
        ]. Using
such a mechanism, a RECALL(v) can be initiated by disinhibition of the neural space Nv while the
content space does not receive any bottom up input. The increased excitability of recently activated
neurons in Nv ensures that the most recently active assembly is activated which in turn activates the
corresponding content through its (previously potentiated) feedback connections to content space C.
The viability of this model for the recall of previously bound content was confirmed in simulations
of the spiking neural network model described above, see [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ] for details.
      </p>
      <p>
        Apart from the creation of assembly pointers and recall of content, two further operations have been
postulated to be essential for many higher cognitive functions [
        <xref ref-type="bibr" rid="ref19">19</xref>
        ]. The first is COPY(u, v) that
copies the content of variable u to variable v. In our model, the copy operation creates an assembly
pointer in neural space Nv for variable v to the content to which the assembly pointer in neural
space Nu for variable u refers to. This operation can be implemented in our model simply by
disinhibiting Nu in order to activate the corresponding content in C followed by a disinhibition of
Nv in order to create an assembly pointer there. A final fundamental operation considered in [
        <xref ref-type="bibr" rid="ref19">19</xref>
        ]
is COMPARE(u, v) which compares whether the content of u equals the content of v. One possible
implementation of this operation in our model is a readout neuron that receives depressing synaptic
connections from the content space. Then, when the content for Nu and Nv is recalled in sequence,
readout synapses will be depressed for the content of Nv if and only if the content of Nu equals
the content of Nv. Such a “change detecting” readout thus exhibits high activity if the contents
of Nu and Nv are different. We confirmed in computer simulations that these operations can be
implemented in a spiking neural network model of assembly pointers, see [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ].
      </p>
      <p>
        Reproducing experimental data on the binding of agents to roles: Two experiments were
performed in [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ] that provided new insights in how variables may be encoded in cortex. Sentences were
shown to participants where individual words (like “truck” or “ball”) can occur as the agent or as the
patient. In a first experiment, the authors aimed to identify cortical regions that encode the meaning
of such sentences. Four example sentences with the words ”truck” and “ball” are “The truck hit the
ball” (S1), “The ball was hit by the truck” (S2), “The truck was hit by the ball” (S3), and “The ball
hit the truck” (S4). Here, S1 and S2 (and S3 and S4 respectively) have the same meaning. Indeed,
the authors showed that a linear classifier is able to classify the meaning of such sentences from the
fMRI signal of left mid-superior temporal cortex (lmSTC). Using our model for assembly pointers,
we can model such situations by binding words either to an agent variable (“who did it”) or to a
patient variable (“to whom it was done”). Under the assumption that lmSTC hosts neural spaces
(with assembly pointers) for the role of words, it is expected that the meaning of a sentence can be
decoded from the activity there, but not from the activity in content space where the identities are
encoded independently of their role. This conjecture was verified through computer simulations of
our spiking neural network model for assembly pointers, see [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ] for details.
      </p>
      <p>
        A second experiment in [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ] revealed that subregions of lmSTC also contain information about the
current value of the variables for the agent and the patient. More specifically, the authors showed
that one is able to predict from the fMRI signal of one subregion of lmSTC the identity of the agent
and from the signal in another subregion the identity of the patient (generalizing over all identities
of other roles and over different verbs). We confirmed through computer simulations that this is also
the case in the proposed model since the assemblies that are formed in the neural spaces Nagent and
Npatient are typically specific to the bound content. Note that such classification would fail if each
neural space consisted of only a single assembly that is activated for all possible fillers [
        <xref ref-type="bibr" rid="ref19">19</xref>
        ], since in
this case no information about the identity of the role is available in the neural space for the variable.
3
      </p>
    </sec>
    <sec id="sec-3">
      <title>Discussion</title>
      <p>
        It has often been emphasized (see e.g. [
        <xref ref-type="bibr" rid="ref20 ref21">20, 21</xref>
        ]) that there is a need to understand brain mechanisms
for variable binding, and several models for variable binding had been proposed in the literature.
These models fall into one of the general classes of pointer-based binding, binding by synchrony, or
convolutional binding. Pointer-based models (e.g., [
        <xref ref-type="bibr" rid="ref19 ref22">19, 22</xref>
        ]) assume that pointers are implemented
by single neurons or populations of neurons which are activated as a whole group. In contrast,
our model is based on the assumption that distributed assemblies of neurons are the fundamental
tokens for encoding symbols and content in the brain, and also for pointers. We propose that these
assembly pointers can be created on the fly in some neural spaces for variables and occupy only a
sparse subset of neurons in these spaces. It has been shown in [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ] that the filler of a thematic role (e.g.
the actor) can be predicted from the fMRI signal of a subregion in temporal cortex when a person
reads a sentence. As shown above, this finding is consistent with assembly pointers. It is however
inconsistent with models where a variable engages a population of neurons that is independent of
the bound content, such as traditional pointer-based models. In comparison to traditional pointer
models, the assembly pointer model could also give rise to a number of functional advantages. In
a neural space Nv for a variable v, several instantiations of the variable can coexist at the same
time, since they can be represented there by increased excitabilities of different assemblies. These
contents could be recalled as different possibilities in a structured recall and combined in content
space C with the content of other variables to in order to answer more complex questions.
Some data shows that the relation between spiking activity and the phases of underlying
oscillatory population activity may play a role in hippocampus and for working memory [
        <xref ref-type="bibr" rid="ref23">23</xref>
        ], indicating
a possible role of synchrony in the binding process. Still, the reliability and capacity of binding
by synchrony is currently unclear. We note that, while our model is not based on precise
synchronization of spikes in different neural spaces, the synaptic coupling between these spaces together
with lateral inhibition leads to some synchronized oscillations of interacting neural spaces in our
simulations. This is consistent with recent experimental data which suggest that common rhythms
in two brain areas support the flow of excitation between these two areas, and also the potentiation
of synapses between activated neurons in both areas [
        <xref ref-type="bibr" rid="ref24">24</xref>
        ].
      </p>
      <p>
        Convolutional binding (see e.g., [
        <xref ref-type="bibr" rid="ref25">25</xref>
        ]) uses mathematical operations on high-dimensional vectors
for variable binding. It had been used in the semantic pointer architecture of Eliasmith [
        <xref ref-type="bibr" rid="ref26">26</xref>
        ] where
spiking neural networks were constructed to perform these rather complex operations. Similarly, the
neural blackboard architecture (NBA, see e.g. [
        <xref ref-type="bibr" rid="ref27">27</xref>
        ]) relies on a number of neural circuits that were
constructed for example to gate activity or to memorize associations. In contrast to these models,
the assembly pointer model focuses on the emergence of binding operations, using assumptions on
the fundamental level of assembly coding, network connectivity statistics, and plasticity processes.
We have presented in this article a model for variable binding through assemblies based on “assembly
pointers”. The model is consistent with recent findings on cortical assemblies and the encoding of
sentence meaning in cortex [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ]. It provides a direct link between information processing on the level
of symbols and sentences and processes on the level of neurons and synapses. The resulting model
for brain computation allows top down structuring of incoming information, thereby laying the
foundation of goal oriented „willful“ information processing rather than just input-driven processing.
Acknowledgments
Written under partial support by the European Union project #604102 (Human Brain Project).
      </p>
    </sec>
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