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<article xmlns:xlink="http://www.w3.org/1999/xlink">
  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>Biochemical Processes of Self-Purification Model in Small Rivers</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Olga Taseiko</string-name>
          <email>taseiko@gmail.com</email>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Tatiana Spitsina</string-name>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Hranislav Milosevic</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Dragan Radovanovic</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Aleksandar Valjarevic</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Faculty of Science and Mathematics</institution>
          ,
          <addr-line>Universityof Pristina, Lole Ribara b.b. 38220 Kosovska Mitrovica</addr-line>
          ,
          <country country="RS">Serbia</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>Siberian State Aerospace University</institution>
          ,
          <addr-line>Krasnoyarsky Rabochy Av., 31, Krasnoyarsk</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
      </contrib-group>
      <pub-date>
        <year>2016</year>
      </pub-date>
      <fpage>487</fpage>
      <lpage>495</lpage>
      <abstract>
        <p>The studying of water self-purification ability is a part of the regional limits developing problem that has the important role for the water quality management. This work shows that a simple model structure can be set up to describe the water quality in small river basins in terms of carbon, nitrogen and phosphorus compounds, when it is unfeasible to use complex models. In this article we used both mathematical modeling and natural sampling of surface water in small river of Central Siberia for the control parameters assessment. The obtained results have allowed analyzing the annual variations of the nitrification and denitrification rates, the mineralization rate of total phosphorus and organic nitrogen. The contribution of main biochemical processes in selfpurification of the small river under conditions of Central Siberia climate is estimated numerically.</p>
      </abstract>
      <kwd-group>
        <kwd>self-purification processes</kwd>
        <kwd>one-dimensional advective-difusive equation</kwd>
        <kwd>upwind approximation scheme</kwd>
      </kwd-group>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>Introduction</title>
      <p>
        Water quality management is an essential problem for preserving water resources
and facilitating sustainable socio-economic development in watershed systems.
However, this task is usually affected by a variety of uncertainties raising from
the stochasticity in hydrodynamic conditions, the variability in the pollutant
transport, the physicochemical processes, the indeterminacy of available water
and wastewater, etc. [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ]. The studying of water self-purification ability is a part
of the problem of the regional limits developing of water quality that has the
important role for the water quality management. Mechanisms of self-purification
processes are strongly influenced by local characteristics of stream. A model
developed for a certain stream type and region is in many cases not applicable
to other stream types or regions. Therefore, local stream characteristics should
be included if the model should be more generally applicable [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ].
      </p>
      <p>
        Self-purification of natural water systems is a complex process that often
involves physical, chemical, and biological processes working simultaneously. The
water is purified in the sense that the concentration of waste material has been
reduced mostly by means of biodegradation processes. Therefore, this process
is very closely tied with the dissolved oxygen content and indeed with all the
sources and sinks of oxygen in a river. So dissolved oxygen (DO) and biochemical
oxygen demand (BOD) are critical water quality parameters. [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ].
      </p>
      <p>
        Research on the modeling of the BOD-DO interaction in the river has been
dominated by the classical model of Streeter and Phelps, which first appeared
in 1925, and has been improved by Dobbins and Camp, Peter Young and Bruce
Beck, C.J.Harris, etc. [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ]. These models have been widely used not only in to
assess water quality, but also to predict damage resulting from the
implementation of water resources management measures [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ]. However, each water quality
model has its own limiting conditions. Therefore, these models still need to be
further studied to overcome these shortcomings.
      </p>
      <p>
        Eutrophication of surface water is closely connected to the self-purification
processes. Eutrophication is enrichment in nutrients, principally phosphorus and
nitrogen, leading to an increase in algae and higher plant growth and a
disturbance of the ecological balance of the aquatic ecosystem. In contrast to standing
waters, the effects of eutrophication and enhanced organic load on running
water ecosystems have not been given much attention [
        <xref ref-type="bibr" rid="ref5">5</xref>
        ] , [
        <xref ref-type="bibr" rid="ref6">6</xref>
        ]. Models that include
all these factors are not yet available but there are many models which focus
on only a part of these processes. Some of these parts can be used to fill in a
complete stream eutrophication model. However, because of differences between
stream types and regions these parts should first be tested for their applicability
to the stream type and region of interest [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ].
      </p>
      <p>
        The present study is based on and continues the project aimed at the
studying of self-purification processes under strong anthropogenic exposure in small
rivers of Krasnoyarsk region that was started by authors in 2013. The
principal equations of the developed self-purification model are specified in [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. The
developed model generally has shown a satisfactory capability in reproducing
the measured values of nitrogen and phosphorus concentrations. The main goal
of this paper is to study the contribution of biochemical transformation of
biogens in self-purification processes of small rivers. For this goal it was developed
mathematical approach for estimation of some biochemical parameters such as
reaeretion and biodegradation rates, transformation rates of phosphorus and
nitrogen compounds. Then it were calculated the amounts of these rates for small
river of Central Siberia and finally, were described the regional features of ones
varieties depends on hydrological conditions.
2
      </p>
    </sec>
    <sec id="sec-2">
      <title>Object description</title>
      <p>The Kacha river considering in this study is the river in the basin of Central
Enisey. Hydraulically the river is subjected to spring flood, but water level
reduces significantly during the summer months, when the water flow quality
becomes critical and the self-purification processes are almost stopped. Sharp
continental climate of Central Siberia, basin geology and vegetation define
hydrological conditions of river flow. So, river flow rate and flow velocity differ
significantly in various hydrological stages. For example, flow rate varies in the
range 0.1 - 41 m3/s, maximum level reaches in spring flood. The maximal value
of water temperature above 20 C is observed in June. All factors define regional
features of the eutrophication processes.</p>
      <p>To verify the developed model it was used the data from state monitoring
network for the period since 1985 to 2014 in Kacha river. The hydrochemical
parameters are measured one time in month (7-12 times in year). In this work
we use the concentrations of oxygen, nitrogen, phosphorus and their compounds.
The hydrological parameters such as river flow rate, temperature, stream velocity
are measured every day. All measurements have carried out in three hydrological
posts of Kacha river whose basin length is about 100 km.</p>
      <p>Moreover, some complex parameters were measured in Kacha river during
2013 - 2016: pH, dissolved oxygen, BOD, redox potential and conductivity. An
area of sampling lies near one of hydrological posts in estuary. These parameters
measured two times in week during free ice cover period (since May to October).
3</p>
    </sec>
    <sec id="sec-3">
      <title>Model structure</title>
      <p>
        One of the difficult problems of self-purification studying - the variety of
ecological structure from source to mouth of river [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ]. The self-purification processes
in the river are complex and can be described by a series of bio-chemical and
hydrological parameters. Biochemical oxidation process through which organic
wastes are consumed leaving behind end products such as carbons, phosphates
and nitrates [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ].
      </p>
      <p>Inorganic carbon availability is determined by levels of dissolved carbon
dioxide. Concentration of carbon dioxide is less significantly than dissolved oxygen
concentration. So, carbon dioxide isn’t key element in self-purification processes
in the Siberian water ecosystems as this can be in equatorial and subequatorial
ecosystems. In continental climate conditions carbon dioxide in water streams
has influence mainly on redox processes. Organic carbon is included in the model
indirectly via biochemical oxygen demand (BOD). The transformation processes
of phosphates and nitrates are coupled in the model directly.</p>
      <p>
        In general the one-dimensional advective-diffusive dynamic for reactive
pollutant neglecting the diffusion term can be written as a differential equation [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ],
[
        <xref ref-type="bibr" rid="ref10">10</xref>
        ], [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ]:
      </p>
      <p>+
 ( ·   )</p>
      <p>( ( ) ·   )


=    ( ) ·   ·  +   ( ) · 
(1)
where    ( ) is a function of decay of  pollutant concentration, that
characterizes transformation velocity defined by the influence of chemical and biological
processes,  ( ) is a function of river flow rate,  is cross-sectional area of river
( 2
) and   ( ) is a runoff of  pollutant.</p>
      <p>
        The equations system based on this (1) includes the equations for
concentration of phosphate    4 , total phosphorus  
, ammonium nitrogen   4
nitrate nitrogen (including nitrite nitrogen)   3 , total nitrogen   ,
biochemical oxygen demand   , dissolved oxygen   2 [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. This model is
onedimensional in the x-direction that can be appropriate only for small rivers that is
characterizing by small fluctuations on vertical and horizontal coordinates. This
assumption wouldn’t be appropriate for large rivers. Two- and three-dimensional
representations are also possible but they have considerable computational
complexity.
      </p>
      <p>
        This system is approximated by numerical equations with time-space grid
(  ;   ) :   +1 =   +  ( = 0,  ),   +1 =   +  ( = 1,  ), where  =  is
time step,  =  is space step. The upwind approximation scheme is used
to solve these equations. It’s explicit scheme based on three-point grid [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ], [
        <xref ref-type="bibr" rid="ref12">12</xref>
        ].
To assure the convergence of numerical scheme here was used the assumption
that space step must be greater than time step.
4
      </p>
    </sec>
    <sec id="sec-4">
      <title>An intensity estimation of biochemical transformation processes</title>
      <p>All model’s rates vary with temperature, microbial metabolism, the composition
and concentration of the biogens from the pollution source.</p>
      <p>
        The estimation of   and   parameters is important for selecting a
solution curve that best represents a real system. However, there is no method
available to determine values that fit precisely to the reality of a given water
body. Reaeration coefficients vary widely due to their dependence on air-water
interface turbulence making them complex and difficult to accurately measure.
High nutrient levels result a high biomass of algae and plants and an increased
biodegradation rate. If algae and plants produce oxygen during the day, they
consume this during the night and an increased biomass means an increase
uptake of oxygen at night. It also means an increase in organic matter when the
organisms die. Decomposition of organic matter is increased in presence of high
nutrient level, there is more organic matter to decompose and decomposition
consumes oxygen. All these processes can lead to oxygen depletion [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ], [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ].
      </p>
      <p>The highest   values may be observed during summer due to the higher
concentration of organic matter while maintaining a contribution of organic
matter in the stream. A high temperature of water river promotes this
process (greater 200C in July). The classical model of Streeter and Phelps defines
the ratio of   /  as the self-purification constant and it is equal 0.50–5.0.
Several studies give methods to estimate   and   that provide
reasonable approximations within predefined limits. However, due to the non-linearity
nature of these coefficients, there is no formula for generic cases.</p>
      <p>The nitrification and denitrification velocity depends on temperature and pH
value of surface water. For example, the denitrification process reaches maximal
activity, when pH value is in the range 7.0–8.2. This process is stopping when
the pH value is lower than 6.1 or higher than 9.6. Nitrogen mineralization is
considered as transformation of organic nitrogen to inorganic.
2) Nitrogen mineralization rate:</p>
      <p>4 ( ) =
3) Nitrification rate:</p>
      <p>( )12 =
4) Denitrification rate:
 ( ) 3 =
 
 
1</p>
      <p>1</p>
      <p>1
−
 ·</p>
      <p>· −
1  ( ( ) ·   4</p>
      <p>)
 (  4</p>
      <p>)
· −
·
︂(  ( 
︂(
︂(
4
1

︂(
︂(

︂(







−
 ·
=
−</p>
      <p>1
 
 ·
 
3</p>
      <p>· −
1  ( ( ) ·   3</p>
      <p>)
 (  03 )
· −
1  ( ( ) ·   )</p>
      <p>(  )</p>
      <p>Primarily, decay rates were included in the self-purification model as
constants. However, the results of numerical calculations were differing from natural
measurements considerably. This can was connected with significantly seasonal
variability of these rates.</p>
      <p>
        The algorithm of calculation of destruction rates includes next steps. Firstly,
the equation (1) is written as the system including seven equations for next
variables: concentrations of phosphorus compounds  
and   
4 , ammonium
compounds  
solved oxygen   2
4 ,  
3 and  
3 , biochemical oxygen demand  
, and
dis. These equations were specified in [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. Next the equations
for biochemical destruction rates are obtained by algebraic manipulations with
previous system. Finally, the rate’s equations are written according numerical
scheme. As a result of algorithm’s applying it was obtained a system of six
numerical equations:
1) Mineralization rate of total phosporus:
 ( )  4 =
 (   4
)
1  ( ( ) ·    4
)
      </p>
      <p>+  ( )  4
−  ·
 ·
−
−
−</p>
      <p>)
+
1  ( ( ) ·  
)</p>
      <p>−  ( )
+  ( ) 4 +  ( ) 4 ·  
+  ( ) 3 +  ( )12 ·   4
+  ( ) 3 ·   03 ·   2/
 ( )
6) Reaeration rate:
5) Biochemical degradation rate:
 ( )
=</p>
      <p>1
  2
· −
 (  2 )
−  ·
1  ( ( ) ·   2 ) +</p>
      <p>+ ( )12 ·   4 ·   2/
+  ( )
·  
︀)
︂)
︂)
︂)
︂)
︂)
(2)
(3)
(4)
(5)
(6)
(7)
where   2/ is the yield factor describing the amount of oxygen used for
denitrification ( 2/ ),   2/ is the yield factor describing the amount of
oxygen used for nitrification ( 2/ ).</p>
      <p>Time-space grid for the equations (2)-(7) is the same as for equation (1).</p>
      <p>Next step connects to defining run-off values. Low-water small rivers of
Eastern Siberia are recharged mostly by groundwater in winter. This occurs because
all precipitation falls in a solid phase and there is no their thawing. The water
hardness value is the indicator of increase in a share of an underground water.
In spring and summer this parameters is much lower because of influence of
liquid precipitation. The volume of groundwater run-off is calculated with using
the hydrochemical analysis of surface water quality of Kacha river. The greatest
values characterize the groundwater run-off of nitrate nitrogen.
5</p>
    </sec>
    <sec id="sec-5">
      <title>Results and discussion</title>
      <p>The observation results received on three hydrological posts of the state
monitoring network during 29 years were used as input data to calculate the biochemical
parameters. The calculation results for whole time period were averaged monthly.
In this study the length of computational domain was 100 km, space step was
0.5 km and time step was 1 day.</p>
      <p>Some results of calculations by the system (2) - (7) are shown on Figure 1
2. Receiving numerical functions for describing the transformation rates allows
considering an influence of all factors without construction of functional
dependences. In general, the values of transformation rates demonstrate inhibition of
self-purification processes in river.</p>
      <p>Seasonal factor has influence on variations of all modeling parameters. The
maximal values of reaeration rate are obtained for period from end of April to
early in June. This can be explained by flood peak in Kacha river when flow
rate and water level are highest. A decreasing of the nitrogen mineralization
rate is induced by some reasons having regional features such as low flow rate,
low concentration of dissolved oxygen and high level of chemical pollution. The
biodegradation rate depends mostly on phytoplankton activity that is minimal
in summer low water (during July). The value of this rate is increasing
significantly in the period of spring and autumn high water seasons. The obtained
dependencies of biochemical rates characterize both common seasonal variations
features and regional specialty, for instance, high water level during flood, short
vegetation period and low water temperature.</p>
      <p>Variability ranges of the transformation rates and parameters of developing
model are presented in Table 1. The variations of biochemical purification rates
are studying not often, so ones have shown as variability ranges to compare
with the data that were given for other rivers. These values agree in general
with values obtained in other rivers and regions. However, exact comparison
is incorrect because literature data were calculated for various water bodies
differing both in climatic and hydrological conditions.</p>
      <p>All factors influencing on the variability of biochemical parameters are
generalized in Table 1. A water temperature is common factor for the most of
calculated rates. Numerical estimations of temperature influencing on studied
rates haven’t obtained in this study. Overall on the base of water quality
monitoring data it can conclude that the main processes of biogens transformation
and water self-purification are observed in the period from April to October,
when water temperature is higher than 0∘ C. Winter period is characterized the
presence of ice cover on water surface, so the sampling in studied river aren’t
executed. And to estimate the values of biochemical parameters in this period
it’s impossible.</p>
      <p>Table 1 presents a coefficient that was named in this study the contribution
to the model accuracy. To define one the calculations with using equation (1) are
executed for rates   ,   ,  12,   3 ,    4 ,   4 as constant values and
as functions of time (as shown in Fig. 1). The contribution to the model accuracy
was obtained on the base of comparison of above mentioned calculations with
monitoring data (Table 1). This coefficient characterizes numerically an influence
of considering the biochemical rates like time functions in the developed model.
This allows taking into account the influence of seasonal variability of all factors.</p>
      <p>All processes in small rivers have different velocity, but the velocity of
phosphorus transformation is a slowest. It can be explain that phosphorus
concentragiven algorithm was used to define the values of reaeretion and biodegradation
rates, transformation rates of phosphorus and nitrogen compounds for small river
in Central Siberia. It was analyzed the influence of regional hydrological and
meteorological factors on temporal variations of biochemical coefficients of
selfpurification processes. It was estimated the contribution of developed approach
to accuracy on numerical calculating of studying processes in comparison with
experimental measurements.</p>
      <p>To improve reproducing the measured values via model calculation the daily
variations of the rates giving the greatest contribution to model accuracy will be
studied further. The developed model can be useful to solve some problems, for
instance an optimization of environmental monitoring, a forecasting of ecosystem
productivity, a developing of regional water quality limitations and management
of water quality.</p>
    </sec>
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