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  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>Ontological Description of Meteorological and Climate Data Collections</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>© A.A. Bart</string-name>
          <email>bart@math.tsu.ru</email>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
          <xref ref-type="aff" rid="aff2">2</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>© V.V. Churuksaeva</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
          <xref ref-type="aff" rid="aff2">2</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Institute of Atmospheric Optics SB RAS</institution>
          ,
          <addr-line>Tomsk</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>Proceedings of the XIX International Conference “Data Analytics and Management in Data Intensive Domains” (DAMDID/RCDL'2017)</institution>
          ,
          <addr-line>Moscow</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
        <aff id="aff2">
          <label>2</label>
          <institution>Tomsk State University</institution>
          ,
          <addr-line>Tomsk</addr-line>
          ,
          <country country="RU">Russia</country>
        </aff>
      </contrib-group>
      <fpage>266</fpage>
      <lpage>272</lpage>
      <abstract>
        <p>The first version of the primitive OWL-ontology of collections of climate and meteorological data of Institute of Monitoring of Climatic and Ecological Systems SB RAS is presented. The ontology is a component of expert and decision-making support systems intended for quick search for climate and meteorological data suitable for solution of a certain class of applied problems.</p>
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>1 Introduction</title>
      <p>Today every large meteorological center uses
original meteorological models for calculation of climate
and meteorological parameters, which can differ both in
the level of detail and set of calculated values of
physical parameters. During the reanalysis of a
meteorological situation, key meteorological parameters
corresponding to measurements at weather stations are
usually taken into account.</p>
      <p>
        The results of climatic numerical simulation,
weather forecast, or reanalysis of meteorological fields are
collections of meteorological parameters that
characterize the state of the atmosphere. They are represented by
data arrays in common formats, e.g., grib [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ], netCDF
[
        <xref ref-type="bibr" rid="ref12">12</xref>
        ], HDF5 [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ], etc.
      </p>
      <p>
        At Institute of Monitoring of Climate and Ecological
Systems SB RAS (IMCES SB RAS), the data
processing environment [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ] has been developed for
representing collections of meteorological data; the
environment is provided by sets of metadata that characterize
physical parameters entering into the above collections.
The practice showed restriction of the use of only
localized applications in this environment. Inclusion of
external applications resulted in creation of a new system
– virtual information platform “Climate+” [
        <xref ref-type="bibr" rid="ref17">17</xref>
        ], where
data are represented in the netCDF format.
      </p>
      <p>
        When using climate data from different collections
of numerous data manufacturers, the problem arises of
ambiguous identification of physical parameters from
these collections. The sense of physical parameters in
the collections agrees with physical parameters advised
by World Meteorological Organization (WMO). They
are described in the taxonomy of the WMO ontology
Codes Registry [
        <xref ref-type="bibr" rid="ref19">19</xref>
        ], as well as in the taxonomy of the
ontology of the GRIB Discipline Collection [
        <xref ref-type="bibr" rid="ref16">16</xref>
        ]
intended for the use in the Climate Information Platform
for Copernicus (CLIPC).
      </p>
      <p>The ontology description of data collections in the
form of a primitive (simplified) formal OWL-ontology
is intended for the selection of data collections within
an expert system, which can be used during solution of
an applied task of an object domain.</p>
      <p>The ontology approach selected for the solution of
the problem stated consists in the following. An
ontology description is constructed for an applied problem. In
addition to the physical statement, the description
should include the mathematical statement of the task,
i.e., a mathematical model with equations. Variables,
which conform the WMO classification, and limitations
are described in the form of an OWL-ontology. On the
one hand, the set of parameters includes common
meteorological parameters, such as sea level pressure,
surface pressure, air temperature and humidity, wind speed
and direction, and so on. This allows comparison of the
computed values with the weather station measurement
results. On the other hand, both meteorological and
climate models supplemented by an applied task compose
a component of a more complex model, where the
results of prognostic calculations by
climate/meteorological parameters are used for the
solution of applied problems in different fields of human
activity. This, in turn, enriches collections of climate
and meteorological data with values of new physical
parameters.
2 Virtual data processing environment</p>
      <p>
        Approaches used in the creation of the prototype
of a subject virtual data processing environment
(VDPS) for the analysis, estimation, and forecast of
the impacts of global climate changes on the natural
environment and climate of a region were mainly
developed during the design of the “Climate” web
GDS [
        <xref ref-type="bibr" rid="ref4 ref5">4,5</xref>
        ]. This sub-ject GDS has been designed with
the use of up-to-date information and communication
technologies, is based on the conceptions of spatial
data infrastructure (SDI) [
        <xref ref-type="bibr" rid="ref10 ref2">2, 10</xref>
        ], and grounds a
software infrastructure for the complex use of
geophysical data and information sup-port of
integrated multidisciplinary scientific researches in the
modern quantitative meteorology. We have se-lected
it as a subject component of VDPS for Earth sci-ences.
A web geoportal [
        <xref ref-type="bibr" rid="ref1 ref9">1, 9</xref>
        ] is a single access point to
subject spatial data, processing procedures and
results [
        <xref ref-type="bibr" rid="ref1 ref9">1, 9</xref>
        ]. The portal allows a user to search for
geoinfor-mation resources in metadata catalogues, to
form sam-ples of spatial data according to their
characteristics (access functionality), and to manage
tools and applica-tions for data processing and
mapping.
      </p>
      <p>
        The GDS Web Client [
        <xref ref-type="bibr" rid="ref13 ref6">6, 13</xref>
        ] is the main tool of
the user’s desktop. It ensures the fulfillment of
OGC re-quirements for web services: spatial data
visualization (Web Map Service—WMS), data
representation in vec-tor (Web Feature Service—
WFS) and bitmap formats (Web Coverage Service—
WCS), and their geospatial processing. It provides
for the access to collections of climate data and tools
for their analysis and visualiza-tion of the results
via typical GDS graphical web browser. The Web
Client satisfies the general require-ments of INSPIRE
standards and allows selection of data set,
processing type, geographic region for the analysis
of processes, and representation of the pro-cessing
results of spatial data sets in the form of WMS/
WFS map layers in bitmap (PNG, JPG, Geo-TIFF),
vector (KML, GML, Shape), and binary formats
(NetCDF).
      </p>
      <p>Today, the VDPS prototype combines data
collec-tions (reanalyses and climate simulation
results and weather station measurements) within the
unified geo-portal, supports the statistical analysis of
archive and required data, and provides access to
the WRF and «Planet Simulator» models. In
particular, a user can run a VDPS-integrated model,
preprocess the results, pro-cess them numerically and
analyze, and gain the results in graphical
representation. The prototype provides for specialists
that participate in a multidisciplinary re-search
process prompt tools for integral study of climate and
ecological systems on the global and regional
scales. With these tools, a user that does not know
programming is able of processing and graphically
representing multidimensional observation and simulation
data in the unified interface with the use of the
web browser.</p>
    </sec>
    <sec id="sec-2">
      <title>3 VDPS prototype capabilities</title>
      <p>Support of the following data sets is built in the
prototype: NCEP/NCAR reanalysis, ed. II, JMA/
CRIEPI JRA-25 reanalysis, ECMWF ERA-40
reanalysis,</p>
      <p>ECMWF ERA Interim, MRI/JMA APHRODITE’s
Water Resources Project data, DWD Global Precipitation
Climatology Centre data, GMAO Modern
EraRetrospective analysis for Research and Applications
(MERRA), reanalysis of the joint Project «Monitoring
atmospheric composition and climate (MACC)»,
NOAA-CIRES Twentieth Century Global Reanalysis, ver.
II, NCEP Climate Forecast System Reanalysis (CFSR),
simulation results obtained with the use of global and
regional climate and meteorological models.
Observation data from weather stations from the territory of the
former USSR for the 20th century included in the
PostGIS database are also accessible.</p>
      <p>Data processing
1. Statistical characteristics of meteorological
parameters: sample mean, variance, excess, median,
minimum and maximum, and asymmetry.
2. Derived climate parameters: vegetation period
duration, sum of effective temperature, Selyaninov
hydrothermal coefficient.
3. Periodic variations: standard deviation, norms,
aberrations, amplitudes of diurnal and annual variations.
4. Non-periodic variations: duration and repeatability
of atmospheric phenomena with meteorological
parameters below or above the limits specified at
different time points.</p>
      <p>Then a user can either analyze the results or
continue adding new layers on the map. To study the results,
the user is provided for a possibility of selecting a
geographical region, scaling, getting values from all layers
at a point, additionally processing earlier results (e.g.,
comparison between data from different layers). In
addition to the direct analysis of geophysical data, a used
can carry out joint researches with other user, share the
results, and use proper data collections in the
processing. In general, this hardware-software complex
provides for distributed access, processing and
visualization of large collections of geospatial data with the
use of cloud technologies.</p>
      <p>The data processing environment “Climate”
developed at IMCES SB RAS limits possibilities of users by
local software applications. A current task is to extend
the environment by external user applications. For this,
the corresponding problems should be specified in
general. Below we describe one of possible classes of
problems connected with decision-making.</p>
    </sec>
    <sec id="sec-3">
      <title>4 General definition of the problem</title>
      <p>The “Climate+” virtual information platform
includes collections of meteorological and climate data. It
is intended for the data representation with the use of
GIS technologies. Its further development is oriented to
providing researchers possibilities of using selected data
sets or their parts as input data. Most collections include
data related to some (not all) spatiotemporal objects of
the Earth; different collections often include different
sets of physical parameters. To search for required
spatiotemporal objects and their meteorological and clime
characteristics, it was necessary to create a
corresponding expert system on the basis of a
knowledge base on spatial objects of the data
collections and their parameters.</p>
      <p>
        In this work, we discuss questions of creation of a
knowledge base for the expert system. The main
problem which has been solved is substantiation of the
reduction problem solution [
        <xref ref-type="bibr" rid="ref20">20</xref>
        ] or, in other words,
construction of typical individuals of an OWL-ontology
that characterize properties of spatiotemporal objects
from the collections. The development of the
conceptual part of the ontology (T- and R-box) is connected in
our solution with classification of meteorological and
climate parameters and is briefly described below.
      </p>
    </sec>
    <sec id="sec-4">
      <title>5 Taxonomy of meteorological parameters</title>
      <p>
        The OWL DL language [
        <xref ref-type="bibr" rid="ref14">14</xref>
        ] is used for the ontology
description of the domain that generalizes, in particular,
related spatiotemporal objects. These objects can be an
air layer over a bounded territory, upper soil layer on
this territory, or, in more specific cases, forests, fields,
or long roads. There are physical and chemical
processes connected with the objects; they are described by
numerical models and used in calculations. Input values
of the physical parameters are required for the
calculations. The processes under study can relate to different
temporal and spatial scales and be described on
different levels of detail. Let us note that coupling of several
mathematical models requires knowledge of sets of
input and output parameters and their spatiotemporal
characteristics.
      </p>
      <p>The taxonomy of physical parameters allows
forming sets of properties of spatiotemporal objects of a
domain for solution of specific applied tasks. This
taxonomy is used in the OWL-ontology for T-box
construction.</p>
      <p>
        When developing the decision-making support
system on the basis of both meteorological and climate
data, the parameters should be matched. Therefore, the
WMO classification in version [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ] is included in the
ontology. This matching allows describing applied tasks
of the domain in common terms.
      </p>
      <p>
        There are climatic and meteorological resources
[
        <xref ref-type="bibr" rid="ref16 ref19">16, 19</xref>
        ] that use the WMO classification of names of
meteoparameters for the GRIB format for data storage
[
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. First of all, WMO Codes Registry created for the
aviation with the aim of supporting data exchange in the
AvXML format; it is based on RDF and SKOS
recommendation.
      </p>
      <p>
        In our OWL-ontology of climate information
resources, we created classes and individuals that
correspond to names of meteorological parameters, e.g., the
Meteorological_Products class and subclasses,
according to [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ]. In the primitive OWL-ontology of climate
information resources described below, classes and
individuals are created that correspond to names of
meteorological parameters according to [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ]. Individuals that
unambiguously characterize physical parameters by
their name [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ] have been created in each subclass
Thermodynamic_Stability_category,
Atmospheric_Chemical_Constituents_category,
Electrodynamics_category, Mass_category,
Longwave_radiation_category, Temperature_category,
Short-wave_radiation_category, Aerosols_category,
Moisture_category, Radiology_Imagery_category,
Momentum_category, Trace_Gases_category,
Cloud_category, and Physical_Atmospheric_category.
      </p>
      <p>
        For the INMCM4 collection, which corresponds to
output data of the INMCM4 climate model of general
atmospheric and ocean circulation [
        <xref ref-type="bibr" rid="ref18">18</xref>
        ], classes and
subclasses were created corresponding to model
variables. These classes agree to the corresponding WMO
classes.
      </p>
    </sec>
    <sec id="sec-5">
      <title>6 Primitive ontology of “Climate+” platform data</title>
      <p>The OWL DL developed and formalized ontology
of climate information resources describes the current
state of collections of data arrays of the data processing
environment as one of the main Russian information
resources on climate data. Numerical data are
represented by data arrays that are stored in netCDF files.
The data arrays are grouped in data sets. All data arrays
in a set should: (a) be received at one temporal or
spatial grid; (b) cover the same time interval; (c) be
received under the same simulation or observation
conditions (if possible); (d) be represented by a set of netCDF
files, which include the same physical parameters. The
data sets are grouped in data collections. A data
collection is an ensemble of data sets received by an
organization within a project, but represented on different spatial
or temporal grids or for different model scenarios. In
particular, a collection can consists of the only data set.</p>
      <p>The basic classes in the OWL-ontology are:
Collection, Spatiotemporal_object, Organization, Data_set,
Data_array, Scenario, Spatial_resolution,
Physical_quantity, Physical_quantity_values, Unit,
Longitudes_array, Time_step, Latitudes_array,
Height_levels_array, and Times_array. The
spatiotemporal system is a four-dimensional object determined by
arrays of numerical values of longitudes
(Longitudes_array), latitudes (Latitudes_array), height levels
(Height_levels_array), and time labels (Times_array),
which are subclasses of the class of the list of values of
a physical parameter and, therefore, numerical arrays of
one physical parameter (Physical_quantity) in certain
measurement units (Unit). They can be described by:
the number of members of the array of a physical
parameter (has_number_of_values), its minimal value
(has_minimum_value) and maximal value
(has_maximum_value), or by numerical values of the
parameter (has_value). A data array (Data_array) is an
ordered list of numerical values of a physical parameter
(Physical_quantity), as a property of the spatiotemporal
system (has_spatiotemporal_system), at each 4D point
(longitude, latitude, height level, and time) of the
spatiotemporal system (Spatiotemporal_system). In the
OWL-ontology, a data array (Data_array) is a subclass
of the class Physical_quantity_values and, hence, is a
numerical array of values of one physical parameter
(Physical_quantity) in certain measurement units (Unit);
it is described by the number of members
(has_number_of_values), maximal values
(has_minimum_value) and minimal values
(has_maximum_value) of the physical parameter. A
data array (Data_array) belongs (has_data_array) to a
data set (Data_set), which differs from other data sets
by the model scenario (Scenario), spatial resolution
(Spatial_resolution), time step (Time_step), and
belonging to one collection (Collection). A data collection
(Collection) consists of (has_data_set) data sets
(Data_set) and belongs (has_organization) to one
organization (Organization). The OWL properties of the climate
data ontology are represented in Tables 1 and 2.</p>
      <p>Definitions of object properties are given in first
three rows of Table 1; their unique identifying
properties, in the fourth row; the range of definition (the first
row) and range of values (the third row) are specified
for each property. Definition of the data array properties
are given in the first three rows of Table 2; unique
identifying properties are given in the fourth row. The range
of definition (the first row) and range of values (the
third row) are specified for each property from the
second row.</p>
      <sec id="sec-5-1">
        <title>Individuals of the OWL-ontology are shown in</title>
        <p>ovals; literal values are given in rectangles; the
arrows show properties with unique identifiers in small
rectangles, taken from Tables 1 and 2. Three arrows
mean probable property cardinality higher than unity.
Three overlapped ovals mean probable number of
individuals of the OWL-ontology larger than unity.
The individual “Data_collection” is connected by the
property “has_data_set” with the individuals
“Data_set”, each of which is connected by the property
“has_data_array” with individuals ”Data_array”.</p>
        <p>The domain analysis of climate numerical data
arrays of the “Climate+” platform, stored as NetCDF
files, allows the description of a primitive ontology of
climate data of this platform in the OWL DL
language. The primitive ontology is a simple and easily
extended systematization of information resources
required for the further work on the development of
the decision-making support system.</p>
      </sec>
      <sec id="sec-5-2">
        <title>To construct the climate data ontology of the</title>
        <p>“Climate+” platform the software has been developed
for the formation of the fact-based block (A-box). An
A-box has been formed for the climate data ontology
using this software. Facts have been retrieved from
the analysis of 80 Tb of climate data from the
“Climate+” platform over 13 numerical data collections,
which include 36 data sets and 793 data arrays. All
the climate data collections include description of 170
spatiotemporal systems and 156 physical parameters
that characterize properties of these systems.</p>
      </sec>
    </sec>
    <sec id="sec-6">
      <title>7 Conclusions</title>
      <p>The prototype of subject virtual data processing
environment has been developed to provide for
researchers, specialists, and people that make decisions
an access to different geographically distributed and
georeferenced resources and climate data processing
services via a typical web browser. It includes a
geoportal, systems for distributed storage, processing,
and providing of spatial data and results of their
processing. In particular, it allows the simultaneous
analysis of several subject sets of climate data with
the use of up-to-date statistical methods and, thus,
revealing the impacts of climate changes on
ecological processes and human activity. After finishing the
work on the prototype, different interactive web tools
are to be developed for the profound analysis of
climatic variables and their derivatives provided by the
subject geoportal.</p>
      <sec id="sec-6-1">
        <title>The developed software is used for processing</title>
        <p>spatial datasets, including observation and reanalysis
data, for the spatiotemporal analysis of recent and
probable climate changes, with the special focus on
extreme climate phenomena in northern latitudes.</p>
        <p>The primitive OWL-ontology of climate and
meteorological collections of IMCES SB RAS is
constructed; it can be used for the search and selection of
data for classes of applied problems in coupled
decision support systems. The matching of physical
parameters of applied tasks with IMCES SB RAS
collections is carried out in WMO accepted terms.</p>
      </sec>
    </sec>
    <sec id="sec-7">
      <title>8 Acknowledgment</title>
      <p>The authors thank the Russian Science Foundation
for the support of this work (developing of
webservices and solution of reduction problems) under
the grant No16-19-10257. We also thank Russian
Foundation for Basic Research (16-07-01028) for the
support of work (conceptualization of domains)
partially described in the sections 4, 5, 6 of the article.</p>
    </sec>
  </body>
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