<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.0 20120330//EN" "JATS-archivearticle1.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink">
  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>The Joint Ontology Workshops Episode 3: The Tyrolean Autumn of Ontology</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>CREOL j DAO j DEW j EPINON j FOMI FOUST II j ISD</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>j ODLS j SHAPES</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>j WINKS</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Bozen-Bolzano</institution>
          ,
          <addr-line>South Tyrol</addr-line>
          ,
          <country country="IT">Italy</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>Free University of Bozen-Bolzano</institution>
        </aff>
        <aff id="aff2">
          <label>2</label>
          <institution>me Euzenat</institution>
          ,
          <addr-line>Dagmar Gromann, WINKS</addr-line>
        </aff>
      </contrib-group>
      <pub-date>
        <year>2017</year>
      </pub-date>
      <abstract>
        <p>Stefano Borgo j Oliver Kutz j Frank Loebe j Fabian Neuhaus And for the JOWO Workshops</p>
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>-</title>
      <p>Editors</p>
    </sec>
    <sec id="sec-2">
      <title>JOWO { The Joint Ontology Workshops</title>
      <p>JOWO 2017|Episode III: The Tyrolean Autumn, was the third edition of the
`Joint Ontology Workshops', which comprised a confederation of ten ontology
workshops. It was hosted by the Free University of Bozen-Bolzano and held
between September 21{23, 2017 in Bolzano, Italy.1 JOWO's mission is to provide a
platform for the diverse communities interested in building, reasoning with, and
applying formalised ontologies in the wide spectrum of Information Systems,
Arti cial Intelligence, Philosophy, Linguistics and Cognitive Science, both in theory
and applications.</p>
      <p>The 2017 edition of JOWO collocated workshops that cover a broad spectrum of
contemporary applied ontology research, including its philosophical and
methodological foundations (FOUST II, DEW), the application of ontologies in
particular domains (ODLS, FOMI), the role of ontology in related research areas
like cognition (ISD3, EPINON), context (CREOL), data and knowledge (DAO,
WINKS), shape and patterns (SHAPES 4.0).</p>
      <sec id="sec-2-1">
        <title>JOWO 2017 included the following ten workshops:2</title>
        <p>CREOL International Workshop on Contextual Representation of Objects and</p>
      </sec>
      <sec id="sec-2-2">
        <title>Events in Language3</title>
      </sec>
      <sec id="sec-2-3">
        <title>DAO International Workshop on Data meets Applied Ontologies4</title>
      </sec>
      <sec id="sec-2-4">
        <title>DEW International Workshop on Ontology Debugging &amp; Evaluation5</title>
      </sec>
      <sec id="sec-2-5">
        <title>EPINON International Workshop on Epistemology in Ontologies6</title>
      </sec>
      <sec id="sec-2-6">
        <title>FOMI 8th International Workshop on Formal Ontologies meet Industry7</title>
      </sec>
      <sec id="sec-2-7">
        <title>FOUST II 2nd Workshop on Foundational Ontology8</title>
      </sec>
      <sec id="sec-2-8">
        <title>ISD3 3rd Image Schema Day9</title>
      </sec>
      <sec id="sec-2-9">
        <title>ODLS 8th International Workshop on Ontologies and Data in Life Sciences10</title>
      </sec>
      <sec id="sec-2-10">
        <title>SHAPES 4.0 - THE SHAPE OF THINGS 4th International Workshop on SHAPES11</title>
      </sec>
      <sec id="sec-2-11">
        <title>WINKS International Workshop on Interaction-Based Knowledge Sharing12</title>
        <p>JOWO 2017 was a great success. There were about 100 submissions, 69 accepted
papers, and the conference had more than 100 participants. Particularly
memorable were the four keynotes by Antonio Chella, Giancarlo Guizzardi, Alessandro
Mosca, and Todd Oakley, and the concert by the \Hyperinstruments Ensemble"
lead by Nicola Baroni.</p>
        <p>10See https://wiki.imise.uni-leipzig.de/Gruppen/OBML/Workshops/2017-ODLS
11See http://www.loa.istc.cnr.it/workshops/SHAPES4/
12See http://www.iiia.csic.es/winks/</p>
        <p>JOWO 2017 Workshops</p>
      </sec>
    </sec>
    <sec id="sec-3">
      <title>Contextual Representation of Objects and Events in Language (CREOL)</title>
      <p>Dealing with context is a key factor in the conceptualisation of human experience,
and thus a major issue for understanding natural language, and a challenging
issue for AI. It is well known that some properties of objects and events may
be activated according to the context of occurrence, thus determining access to
partial salient information rather than to all information. One typical case
involving objects is that of an orange being passed between two children, or the
same orange peeled on a table: in the former case the roundness prevails over
other traits, and the orange is likely being used to play; in the latter one, the
edible features are those principally conveyed by the scene. Similar and higher
plasticity associated to contextual features also characterises events. Events are
complex entities by nature, and representing and extracting them from textual
documents is not a trivial task. Existing lexical resources encode very basic
information on events: their linguistic realisation, roles of participants, and types.
Additional properties of events are currently missing: duration of events, event
internal substructure, event pre- and post- situations, relations to other events in
terms of explanatory/causal and temporal relations. These properties are
essential to promote reasoning on events and their participants, and they may vary
according to the speci c context of occurrence in a text/document.
Contextual access to objects and events needs to be investigated at its interface
with language. The design of ontological and linguistic resources that account
for the mentioned semantic phenomena involves collecting contextual information
and devising context-aware procedures. For its rst edition, CREOL has been
organised as one of the Joint Ontology Workshops (JOWO). The Proceedings of the
rst edition collect three original papers: Natural Language Template Selection
for Temporal Constraints by C. Maria Keet; PRiSMHA (Providing Rich
Semantic Metadata for Historical Archives) by Anna Goy and colleagues; and
Collecting Information for Action Understanding: The Enrichment of the IMAGACT
Ontology of Action by Andrea Amelio Ravelli and colleagues.</p>
      <p>The contributed works touch di erent aspects of the relationship between the
representation of (abstract) concepts in ontologies and in language. Each paper
focuses on di erent issues and all are centred around the main topics of the
CREOL workshop: events and roles (the PRiSMHA project), actions and objects
(the IMAGACT project), and the verbalisation of events and their time-related
properties (the paper Natural Language Template Selection for Temporal
Constraints).</p>
    </sec>
    <sec id="sec-4">
      <title>Data meets Applied Ontologies (DAO)</title>
      <p>The goal of the DAO workshop was to provide an opportunity for participants
from academia and industry to present their latest developments in
ontologymediated data integration and analysis techniques, and data-driven industrial
applications. The accepted contributions, ve in total, presented applications of
ontologies and related tools in elds like robotic journalism, civil engineering,
policy monitoring, and 3D factory design. All submissions consisted of a demo
description that was presented at the workshop. In the rst paper, Hermann Bense
describes the textOmatic*Composer, a semantic technology that automatically
generates personalised multi-language news streams from very large scale
ontologies. As application examples, he demoed the Focus Online and Handelsblatt
portals. In another paper, Valerio Santarelli, Giacomo Ronconi, Marco Ruzzi and
Domenico Fabio Savo present OntoGUI, a Protege plugin that allows one to access
heterogeneous data sources according to the ontology-based data access (OBDA)
paradigm. Also related to OBDA, Alessandro Mosca presents an observatory
portal of research and innovation of the Tuscany Region developed using ODBA
technologies. Finally, Walter Terkaj demoed a GUI tool for the instantiation of
OWL ontologies, and he showed, together with Giovanni Paolo Vigan, how the
GUI can be used together with GIOVE-VF, an ontology-based virtual factory
tool that supports the 3D design of factories.</p>
    </sec>
    <sec id="sec-5">
      <title>Ontology Debugging &amp; Evaluation (DEW)</title>
      <p>Ontology engineering is a complex and error-prone task, which is, nonetheless,
fundamental for many knowledge-intensive applications. To a large degree,
successful ontology applications depend on an ability to detect, understand, and
correct errors in ontologies and ontology-based knowledge bases. Success also depends
on an ability to assess how well ontologies meet the requirements of a particular
use. The main goal of the DEW workshop was to recall and advance the state of
the art in ontology evaluation and debugging. Additionally, the workshop aimed
to foster exchange on these topics between research-oriented and
applicationoriented communities. The workshop welcomed submissions describing methods,
tools, and challenges in ontology debugging and evaluation, as well as quality
criteria, metrics, experimental results, and lessons learned. Submissions ranged
in emphasis, focusing to varying degrees on experience, pragmatics, and theory.
Perspectives included those of ontology (re)users, ontology developers, and those
responsible for quality assurance of ontologies incorporated into larger systems.
The workshop accepted a total of four submissions, covering di erent perspectives
on ontology evaluation and debugging. Ricardo Guimar~aes and Renata
Wassermann present preliminary work on the combination of atomic decompositions|a
technique developed in the area of ontology modularisation|and the theory of
local change, through the de nition of a new relevance metric. Jean-Remi
Bourguet, Giancarlo Guizzardi, Alessander Botti Benevides, and Veruska
Zamborlini describe three di erent approaches for representing changes in the standard
web ontology language OWL 2, and compare them through an empirical analysis
based on synthetic, but principled, random instances. In their submission, Claudia
Schon and Ste en Staab studied the problem of instance-level updates of dynamic
knowledge bases, taking into account the terminological knowledge, through a
new notion of query-driven semantics. Finally, He Tan, Anders Adlemo, Vladimir
Tarasov, and Mats Johansson present an evaluation for a real-life ontology from
the avionics domain.
The event was successful, promoting deep and interesting discussions that
permeated beyond the workshop sessions.</p>
    </sec>
    <sec id="sec-6">
      <title>Epistemology in Ontologies (EPINON)</title>
      <p>Formal ontologies and knowledge representation mainly focus on characterising
how a given domain is structured, i.e., they identify a set of concepts, entities, and
relations together with the constraints that hold for this domain. The structure of
the characterisation is usually intended to re ect the point of view of signi cant
experts or a realist view of how things about a particular domain are in reality.
The aim of this workshop is to explore an epistemological stance in formal
ontology and knowledge representation and focus on the assessment of the modelling
provided by the ontology designer. In particular, we are interested in fostering two
intertwined research directions. Firstly, we are interested in promoting discussions
about the epistemological foundations of formal ontologies and of knowledge
representation. A number of timely important problems are related to this point, for
instance: the investigations of cognitively adequate ontological representations,
the investigations on the provenance of data, the problem of the reliability of the
source of information (both human and arti cial, e.g. sensors), the problem of the
epistemic reliability of the classi cation provided by ontology users, the problem
of nding epistemically and cognitively well-founded rationales for the
integration of ontological representations with other representational formats (e.g. deep
neural networks, vector space models etc.).</p>
      <p>Secondly, we are interested in formal and ontological approaches to the de nitions
of the concepts that are relevant to the assessment of the perspective of the
ontology designer. Problems related to this direction include: ontology of general
epistemological concepts (e.g. proof, argument, explanation, epistemic reliability,
trust), ontology of cognitive concepts (perception, reasoning, sensations), ontology
of data and measurements.</p>
      <p>We aim to address to an interdisciplinary audience, by inviting scholars in
philosophy, computer science, logic, conceptual modelling, knowledge representation,
and cognitive science to contribute to the discussion.</p>
      <p>The workshop proposed four contributions that approach the relationship between
ontology and epistemology from heterogeneous interesting perspectives.
Stanislaw Ambroszkiewicz discussed an intuitionistic foundation of the real numbers.
Erden Miray Yazgan Yalkin presented a discussion of the concept of truth in the
Buddhist tradition. Roberta Ferrario articulated a socio-material stance in
developing formal ontologies. Giovanni Buonocore discussed the ontological status of
relations in connection to philosophy of physics.</p>
    </sec>
    <sec id="sec-7">
      <title>Formal Ontologies meet Industry (FOMI)</title>
      <p>FOMI is an international forum where academic researchers and industrial
practitioners meet to analyse and discuss application issues related to methods,
theories, tools and applications based on formal ontologies. There is today wide
agreement that knowledge modelling and the semantic dimension of information play
an increasingly central role in networked economy: semantic-based applications
aim to provide a framework for information and knowledge sharing, reliable
information exchange, meaning negotiation and coordination between distinct
organisations or among members of the same organisation. Theoretical ideas seem often
very promising, but their actual implementation brings up unexpected problems
and issues. The FOMI 2017 Workshop aimed at collecting useful experiences and
lessons learned covering the following areas:
1. Problems encountered in ontology-based applications;
2. New insights on known problematic issues;
3. Success stories of ontology implementations in industry;
4. Best practices on the application of ontological methodologies to real-world
situations.</p>
      <p>The accepted contributions at FOMI 2017, eight in total, address practical
modelling concerns arising out of the application of computational ontologies in elds
like civil engineering, nance, business process modelling and manufacturing. The
two papers presented by Adamo et al. address the current limits of languages
for process knowledge representation like BPMN and UML-AD and propose how
to overcome these limits from an ontology-based perspective. Aameri and
Grueninger introduce an initial set of modular ontologies for manufacturing
applications and sketch an axiomatised ontology to represent geometric and topological
constraints. Terkaj and Pauwels present an algorithm to automate the
modularisation of ifcOWL, that is, the OWL version of the Industry Foundation Classes
(IFC), a well-established standardised data model in the Building Information
Modeling (BIM) area. The purpose is to facilitate the exploitation of Semantic
Web technologies for the Architecture Engineering Construction (AEC) and
Facility Management (FM) industries. Together with Schneider, Terkaj and Pauwels
also present the Building Automation and Control Systems (BACS) ontology
for the integrated representation of cyber-physical systems embedding building
elements, sensors, actuators and devices. In the nancial industry, Blums and
Weigand present the Core Ontology of Financial Reporting Information Systems
for a Shared Ledger Environment (COFRIS) for facilitating the reuse,
transparency and sharing of nancial reporting. In the same direction, the short
paper of Browne et al. presents the implementation of an extended version of the
Financial Industry Business Ontology (FIBO), which is called Global Fund
Reporting Ontology (GFRO), to build semantic-based nancial reporting
compliant with current standards. Finally, the work presented by Detoni et al. provides
a methodology to support ontology development by eliciting experts knowledge
and know-how in conceptual models that are codi ed in the ARIS language. The
approach is validated by a case study in the public security of Brazil.</p>
    </sec>
    <sec id="sec-8">
      <title>2nd Workshop on Foundational Ontology (FOUST II)</title>
      <p>Foundational ontology is about categories of reality or thought which are common
to all or almost all subject-matters. Commonly considered examples of such
categories include `object', `quality', `function', `role', `process', `event', `time', and
`place'. There are several foundational ontologies that provide a systematic
formal representation of these categories, their relationships, and interdependencies.
Amongst existing foundational ontologies, there is both a substantial measure of
agreement and some dramatic disagreements. There is currently no uniform
consensus concerning how a foundational ontology should be organised, how far its
`reach' should be (e.g., is the distinction between physical and non-physical
entities su ciently fundamental to be included here?), and even what role it should
play in relation to more specialised domain ontologies.</p>
      <p>The main use of foundational ontologies is as a starting point for the
development of domain ontologies and application ontologies. The foundational ontology
provides an ontology engineer with a conceptual framework that enables her to
analyse a given domain, identify the entities in the domain as specialisations of
the generic categories in the foundational ontology, and often reuse relationships
(e.g., parthood) from the foundational ontology. The utilisation of foundational
ontologies for the development of domain and application ontologies has two main
bene ts. Firstly, the ontology engineer can reuse an existing set of well-studied
ontological distinctions and design principles instead of having to develop an ad-hoc
solution. Secondly, if two domain ontologies are based on the same foundational
ontology, it is easier to integrate them.</p>
      <p>FOUST is an ontology workshop series that o ers researchers in foundational
ontology an opportunity to present their results. This includes work on speci c areas
of foundational ontology as well as work on particular foundational ontologies.
Amongst speci c areas, one which continues to excite a good deal of discussion
on account of its fundamental nature is mereology, which is concerned with the
analysis and formalisation of the part-whole relation. Several of the papers in
this workshop address various di erent aspects of this topic. Keet, for example,
draws attention to the plethora of di erent forms of part-whole relations that
have been enumerated in the literature (including, for example, spatial parthood,
membership of a collection, material constitution, and participation in a process ),
and explores how the properties of these relations are re ected in the speci c
formalisations adopted by di erent foundational ontologies. Ru and Gruninger are
similarly concerned with handling multiple part-whole relations, but here in the
context of solid physical objects, for which they distinguish components, pieces,
portions, and contained entities, each of which they propose should be handled
by a separate module within a collection of ontologies of solid physical objects.
Barton, Jansen and Ethier discuss a completely di erent aspect of mereology,
focussing on classifying the parthood relations that exist amongst dispositions |
for example `a disposition to break is part of fragility' vs `the solubility of part of
a tablet is part of the solubility of the whole tablet'. Finally Mizoguchi and Borgo
study the notion of functional parthood, for which they propose an analysis in
terms of another fundamental ontological category, roles.</p>
      <p>Several papers in the workshop presented some current developments in existing
foundational ontologies. Porello and Guizzardi propose a rst-order modal
axiomatisation of the Uni ed Foundational Ontology (UFO). Benevides, Bourguet,
Guizzardi and Pen~aloza also work with UFO, speci cally the part (UFO-B)
dealing with the ontology of events, which they show can be formalised within the
Description Logic SROIQ, thus enabling practical application of the theory using
OWL 2 DL. Mizoguchi and Toyoshima present YAMATO, Yet Another More
Advanced Top-level Ontology, with special attention to how it can handle examples
involving change over time. Chui and Gruninger turn their attention to DOLCE,
and in particular the problem of verifying it in the sense of ensuring that the
models of the formal theory conform to the intended models of the ontology. The
method they propose is modular, involving separate veri cation of an exhaustive
set of subtheories of DOLCE.</p>
      <p>The remaining papers cover a diverse set of concerns relating to foundational
ontologies. Gruninger, Chui and Katsumi propose a view of upper ontologies as
composed of a set of generic ontologies each concerned with the axiomatisation
of a particular well-de ned set of generic concepts. As in the paper of Chui and
Gruninger, this leads to the possibility of a modular approach to ontology veri
cation, using in this case the principles enshrined in the Common Logic Ontology
Repository (COLORE). Bennett, Hasse and Gilmore discuss a way of handling
contextually-de ned concepts such as `customer' (de ned in the context of some
commercial business), using a partition of the upper ontology to clarify the
relations between the three broad top-level categories of `independent', `relative',
and `mediating' things. Garbacz discusses a di erent set of issues, relating to the
classi cation of objects on the basis of their `qualitative stability', that is, the
extent to which they are liable to undergo change with respect to their qualities.
Schulz, Boeker, Vera Ramos and Jansen address the matter of ontological
education, taking a close look at two long-established and widely used pedagogical
ontologies, the PIZZA and WINE ontologies, to determine to what extent they
remain t for purpose in the light of more recent developments, proposing suitable
modi cations where they are found to be de cient. Finally Neuhaus presents a
critique of a widely cited de nition of `ontology'.</p>
    </sec>
    <sec id="sec-9">
      <title>3rd Image Schema Day (ISD3)</title>
      <p>Inspired by the concept of an embodied mind, in which all cognition is thought
to manifest as direct consequences to the body's sensorimotor experiences, is the
theory of image schemas. Image schemas are thought to be mental generalisations
from repeated exposure to particular spatiotemporal relationships and capture
concepts such as Containment, Support, Source-Path-Goal and Attraction. The
theory was introduced in cognitive linguistics as a means to explain the large
degree of spatial language found in language concerning abstract concepts as well
as metaphors. In developmental psychology, image schemas are investigated as
part of conceptual learning processes where they are thought to function as
information skeletons for analogical reasoning and concept learning. In design and
in more artistic domains, image schemas are used to describe the experience by
which humans perceive information, for instance, how musical scales often are
visualised as movement along a vertical axis. As of late, research in computer
science has taken a liking to image schemas as they provide a straightforward
way to approach the symbol grounding problem. Therefore, methods in both
machine learning and traditional knowledge representation have been employed to
simulate image schemas. Here, their integration into formal frameworks for
concept invention and analogy engines, as well as how they can aid natural language
processing and understanding are some of the areas that could bene t from the
integration of the information-rich image schemas.</p>
      <p>As image schemas are studied from a wide range of scienti c disciplines, one of
the major issues for the research eld is the prevalence of inconsistent views,
definitions and research terminology. Therefore, one of the main purposes of ISD3
is to provide a meeting point for researchers on image schemas, regardless of
scienti c background, where ideas, methods and results can be discussed, in order
to build bridges and to provide support from di erent directions. In this light,
the workshop has three accepted papers from di erent elds of research. Shingo
Imai approaches image schemas from a multi-linguistic perspective in his paper
\Schema Con ict: Functional Schema and Con gurational Schema". Jamie
MacBeth, Dagmar Gromann and Maria M. Hedblom look at the relationship between
the theory of image schemas and Conceptual Dependency Primitives, a classic
theory in natural language processing in \Image Schemas and Conceptual
Dependency Primitives: A Comparison". Finally, Cli O'Reilly and Randy Harris
take a more mathematical approach by demonstrating how some of the image
schemas can be approached as vector space models in \Antimetabole and Image
Schemata { Ontological and Vector Space Models".</p>
    </sec>
    <sec id="sec-10">
      <title>Ontologies and Data in Life Sciences (ODLS)</title>
      <p>
        Medicine, biology and life sciences produce hardly manageable and often
incomprehensible amounts of data, information, and knowledge. Their computer-based
retrieval, processing, integration, as well as their conceptual foundation,
application, and reuse present ever new challenges to existing methods of knowledge
representation, data bases, and data analysis and retrieval. The workshops on
Ontologies and Data in Life Sciences (ODLS) cover the overall spectrum of
biomedical information management, ranging from experimental data acquisition and
preprocessing across analysis, structuring and interpretation of data, up to
developing structured representations of knowledge, in particular in the form of
ontologies, with their various applications. The primary aim of ODLS is an
interdisciplinary exchange of ideas, fostering collaboration between ontologists, computer
scientists, bio-informaticians, medical information scientists, physicians,
biometricians, bio-chemists and philosophers, in academia and industry.
Works accepted for ODLS 2017 are distinguished into papers (of 6-12 pages) and
extended abstracts (of 2-5 pages). The proceedings comprise ve papers and seven
extended abstracts. Topicwise, the majority of the submissions present a domain
ontology embedded in its speci c application context. Six such works cover a
broad spectrum of domains. (
        <xref ref-type="bibr" rid="ref1">1</xref>
        ) The Spinal Cord Injury Ontology (SCIO) by
Brazda et al. aims at supporting the representation of pre-clinical studies
regarding spinal cord injury therapies. It is utilised in an information extraction lifecycle
to populate a database with information from such studies. (
        <xref ref-type="bibr" rid="ref2">2</xref>
        ) OCL-SOP, the
Ontology for Clinical Laboratory Standard Operating Procedures described by
Maikore et al., de nes laboratory experimental actions and related key entities,
e.g. biochemical entities, equipment and data processing actions. A mobile
application for semantic search in semantically annotated laboratory SOPs serves as
a use case. (
        <xref ref-type="bibr" rid="ref3">3</xref>
        ) Siemoleit et al. start from the BIOPASS project, which is
concerned with a novel approach for navigation systems for surgical interventions.
In its context the BIOPASS Situation Ontology (BISON) is designed to support
situational awareness, by capturing endoscope locations and work steps of
surgical interventions on the basis of anatomical landmarks and procedural data.
(
        <xref ref-type="bibr" rid="ref4">4</xref>
        ) The TNM Ontology (TNM-O) in the work by Zabka et al. is a modular
ontology developed for the management of versions of the Tumor-Node-Metastasis
(TNM) classi cation system. The submission focuses on the use of rules expressed
in the Semantic Web Rule Language (SWRL) to represent mapping criteria
between TNM versions. (
        <xref ref-type="bibr" rid="ref5">5</xref>
        ) Dooley et al. introduce the Genetic Epidemiology
Ontology (GenEpiO) as a central component of the Genomic Epidemiology Entity
Mart (GEEM), an ontology-driven web platform for examining data standards
related to genomic sequence repository metadata requirements. Finally for
applied ontologies, (
        <xref ref-type="bibr" rid="ref6">6</xref>
        ) Tarini and Lange outline early versions of two ontologies, the
Organoleptic Ontology and the Sensory Ontology, which are proposed to cover
sensory aspects of food phenotypes and of the sensory perception of food. Both
are seen to be complementary to existing food ontologies.
      </p>
      <p>
        A second cluster, one with four submissions, focuses even more on ontology-based
applications and less on speci c ontologies. (
        <xref ref-type="bibr" rid="ref7">7</xref>
        ) Enea et al. are concerned with
ontology matching and alignments, in particular with a visualization interface
for ontology alignments. (
        <xref ref-type="bibr" rid="ref8">8</xref>
        ) SONG, the Search Ontology Generator presented by
Uciteli et al., is based on a revised version of the Search Ontology (SO2). SONG
is a tool for generating complex search queries from Excel templates, currently
applied in post-market surveillance of medical devices. (
        <xref ref-type="bibr" rid="ref9">9</xref>
        ) Barton et al. discuss
the utilisation of temporalised medical databases, in particular, their structuring,
in the light of an analysis on the basis of referent tracking. (10) The integration of
two major Argentinian databases, namely the National System of Biological Data
(SNDB) and the Ocean Biogeographic Information System (OBIS), is targeted
by Zarate et al. in an ontology-based manner.
      </p>
      <p>The remaining two works relate to natural language processing, where (11) Schulz
et al. report on experimental ndings regarding the ambiguity of terms in
SNOMED-CT, while (12) Kasac et al. sketch the ontological foundations of their
development of an annotation schema for mentions of drugs in clinical narratives,
currently focusing on discharge letters.</p>
      <p>This overall set of contributions in combination with the Joint Ontology
Workshops (JOWO) keynotes and supporting program has led to a prosperous and
inspiring workshop event in 2017, which was the eighth in a series of workshops
that started in 2009 under the title Ontologies in Biomedicine and Life Sciences
(OBML)13. Since then a work group named OBML14 has been established in the
context of the Special Interest Group Informatics and Life Sciences 15, which is
itself a shared, interdisciplinary group associated with the German Informatics
Society (GI)16 and the German Association for Medical Informatics, Biometry
13See https://wiki.imise.uni-leipzig.de/Gruppen/OBML/Workshops/
14See https://wiki.imise.uni-leipzig.de/Gruppen/OBML/
15See http://fb-ilw.gi.de/
16See https://gi.de/
and Epidemiology (GMDS)17. Moreover, since the third edition OBML/ODLS
workshops have been acknowledged as Supported Events by the International
Association for Ontology and its Applications (IAOA)18.</p>
      <p>The OBML group runs ODLS workshops annually in Central Europe, striving for
international participation also beyond that region. Becoming a part of IAOA's
Joint Ontology Workshops in 2017 has yielded a distinguished ODLS edition and
fruitful interactions with other communities, very well in line with the
interdisciplinary spirit of ODLS.
Shape, Form, and Structure are some of the most elusive notions and are
pervasive in diverse disciplines from humanities (like literature studies, art history) to
sciences (chemistry, biology, physics) and within these from the formal
(mathematics, logic) to the empirical disciplines (engineering, cognitive science,
architecture, environmental planning, design). Within domains such as computer science
and arti cial intelligence research, these notions are understood by mixing their
common-sense meanings (e.g. to make sense of everyday perception and
communication) and ad hoc technical speci cations. Even in the di erent declinations of
design the conception and sense of these notions change considerably. Several
approaches have been proposed within the aforementioned disciplines to study the
very notions of shape, form and structure from di erent viewpoints, yet a
comprehensive treatment of these notions is lacking and no interdisciplinary perspective
has emerged.</p>
      <p>In these years, due to the popularity of the multi-agent approaches, the explosion
of research and application in robotics, the cyber-physical and Internet of Things
views, as well as social turns in geography and cultural heritage, there is a
rising interest in interaction and its forms. The understanding of the term
interaction is challenging due to the di erent types of entities it might involve and to
the many contexts where it may occur. Conceived quantitatively or qualitatively,
interaction can be located among agents and systems, among societies and
cultures, among languages and stimuli, among views and interpretations. It puts an
emphasis on such diverse aspects like emergence on the one hand and repetition
on the other. Furthermore, it suggests a conception of form which is intrinsically
dynamic, linked with temporality and, of course, action. This time-based notion
of shape/form/structure demands not only an analysis of spatial con gurations,
but of spatio-temporal occurrences. As interactions of colours make clear (e.g.
see the studies of Josef Albers), these occurrences may not always be literal
sequences, they can happen simultaneously, but there must be time and space for
something to take place. From here, we can start asking: Which shapes do
patterns of interaction have? Are patterns themselves static or dynamic? What does
that mean? Are these meta-level shapes easier to formulate or formalise? Which
patterns of (social) interaction are desirable? How to use them for play, planning,
storytelling, collaboration and other creative purposes?
17See https://gmds.de/index.php?id=228
18See http://iaoa.org/
This edition of Shapes 4.0 covers several topics. The paper \The Interplay
between Shape and Feature Representation" by San lippo et al. discusses modelling
constructs for shape representation, from low-level geometric elements to
general entities like protrusions and holes. The paper considers di erent modelling
options from both the ontological and practical perspectives and provides some
representation patterns. The paper by Cantale et al. \The Shape of a Benedictine
Monastery: The SaintGall Ontology" presents an OWL 2 theory that formalises
the layout of the Saint Gall monastery plan. With this work, the authors give the
possibility to compare this ideal Benedictine monastery with its di erent
realisation and reinterpretations around Europe across the centuries. The paper \Show,
Don't Tell: Retrieving Cultural Assets Via Gestures" by Helmer et al. faces the
limitations of textual representation in the case of intangible assets. They focus
on the domain of (hand-held) tools aiming to record the gestures and a richer
context than what is available in today's standard approaches. Maria M.
Hedblom with the paper \Beneath the Paint: A Visual Journey through Conceptual
Metaphor Violation" introduces us to the use of metaphors in artworks and on
how these drive the interaction between an art piece and the observer. The
discussion moves around a concrete painting from the author that is conceptualised
via two metaphoric structures: `UP is GOOD' and `DARK is BAD'. The paper
\Towards an Understanding of Place Forms through the Lens of Social Practice
Theories" by A. Cala ore and G. Boella focuses on the meaning and role of
patterns in the urban environment discussing the identi cation of place forms as
the result of an interaction between the spatial and the social systems. S. Fiorini
and M. Abel, with their contribution \Quality Patterns and Conceptual Spaces",
discuss the understanding of qualities in ontological terms by linking Guarino's
notion of quality elds/patterns and a special approach, called Holistic-Structure
Spaces, within the Conceptual Spaces general framework. \The Shape of the
Other", by Rafael Pen~aloza, is a poem on shapes, people and their being `others'.
Klaus Gasteier, with his paper \Shaping a Structural and Visual Representation
of Strategic Interaction", takes us into the notion of strategic interaction as the
relation between concealed and exposed actions. This work sheds some light on
the understanding and representation of con ict situations, including risks and
potentials, via a new logographic sign language.</p>
    </sec>
    <sec id="sec-11">
      <title>Workshop on Interaction-Based Knowledge Sharing (WINKS)</title>
      <p>Sharing knowledge becomes increasingly important in the age of information and
a growing number of gradually expanding, distributed systems heighten the need
for a dynamic interactive sharing process. Interaction is understood here as any
kind of communication between human and/or arti cial agents. Knowledge can
be learned, extracted, produced or elicited by a wide range of automated systems.
These systems span across various disciplines and application scenarios ranging
from Big Data to the Internet of Things. The increasing number and
heterogeneity of knowledge sources has rendered knowledge sharing proportionally more
complex. With new technologies, new knowledge sources keep on appearing and
a centralised sharing process becomes more and more unrealistic.
Interaction-based knowledge sharing requires particular attention, both for its
ambitious scope and for the fundamental issues that it raises. Indeed, the
interactive property grants this type of knowledge sharing the same advantages as other
dynamic systems. First, distributed sources can bring together their knowledge
without giving precedence to one source. Second, it allows for integration from
which new knowledge can emerge. Finally, interaction permits feedback during
the sharing process, helping systems to control both the process and the success
of the integration. However, the approach also shares the challenges of other
dynamic systems: heterogeneity in vocabularies and methodologies between sources
requires adaptability. Furthermore, new emergent knowledge necessitates the
handling of novelty and unpredictable results. Finally, humans are a source of
knowledge that arti cial agents still have di culties to decipher, especially when they
are using natural language.</p>
      <p>In this rst edition the topics covered in the workshop addressed several of the
above challenges. The paper \Vocabulary Alignment for Agents with Flexible
Protocols" by Paula Chocron and Marco Schorlemmer proposes a task-based
approach to overcoming vocabulary heterogeneity by enabling agents to learn
alignments based on shared procedural knowledge. The used protocols are exible in
the sense that they allow to consider di erences in the speci cations of agents
by assigning weights and penalties. The work of Kemo Adrian and Enric Plaza
o ers \An Approach to Interaction-Based Concept Convergence in Multi-Agent
Systems" which addresses vocabulary heterogeneity from an argumentation-based
perspective. The paper proposes a new formalism to allow agents to argue the
meaning of their concepts with the objective to reach an agreement by means of
concept convergence. Luc a Gomez Alvarez, Brandon Bennett and Adam
RichardBollans address the issue of ambiguity from the perspective of conceptual
vagueness in their work entitled \Talking about Forests: An Example of Sharing
Information Expressed with Vague Terms". The paper presents a framework for the
representation of semantic variability as all admissible precise interpretations of a
vague concept, which is illustrated with the example of `forest'. Finally, Jamie C.
Macbeth presented \Conceptual Primitive Decomposition for Knowledge Sharing
via Natural Language", an approach that focuses on the grounding of
linguistic expressions in primitive decomposition methods building on embodied human
cognition. This representation system allows for an e ective knowledge-sharing
between ambiguous natural language expressions and more rigorous knowledge
structures.</p>
      <sec id="sec-11-1">
        <title>Acknowledgements</title>
        <p>We would like to thank the program committee members and the additional reviewers for
their timely reviewing. We thank our invited keynote speakers|Todd Oakley, Antonio Chella,
Alessandro Mosca, and Giancarlo Guizzardi|for their support and contributions.
We would moreover like to thank the International Association for Ontology and its
Applications, see http://iaoa.org, for providing funding for student grants and the Free University of
Bozen-Bolzano and its event management team for providing generous nancial support and
facilities.</p>
        <p>JOWO 2017 was a supported event of the International Association for Ontology and its
Applications (IAOA) and was jointly organised by the IAOA and the Research Centre on Knowledge
and Data (KRDB) at unibz.</p>
        <p>KRDB
3</p>
      </sec>
      <sec id="sec-11-2">
        <title>JOWO 2017 { Organisation</title>
        <p>Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
Free University of Bozen-Bolzano, Italy
University of Leipzig, Germany
Otto von Guericke University Magdeburg, Germany
Valerio Basile
Tommaso Caselli
Daniele P. Radicioni
University of Mannheim, Germany
University of Bremen, Germany
VU University Amsterdam, The Netherlands
Universite de Nice Sophia Antipolis, France
Hochschule der Medien, Stuttgart, Germany
STLab, ISTC-CNR, Rome, Italy
University of Turin, Italy
University of Turin, Italy
Rensselaer Polytechnic Institute (RPI), USA
VU University Amsterdam, The Netherlands
University of Mannheim, Germany
Bosch Research and Technology Center, Pittsburgh, USA
University of Florence, Italy
Fondazione Bruno Kessler, Trento, Italy
University of Turin, Italy
Universita degli Studi di Udine, Italy
Saarland University, Germany
University of Cambridge, UK
Roberto Confalonieri
Andrea Janes
Diego Calvanese</p>
        <p>Programme Chairs
Free University of Bozen-Bolzano, Italy
Free University of Bozen-Bolzano, Italy
Free University of Bozen-Bolzano, Italy
City, University of London, UK
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
Free University of Bozen-Bolzano, Italy
Free University of Bozen-Bolzano, Italy
SIRIS Academic, Barcelona, Spain
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
Free University of Bozen-Bolzano, Italy
Goldsmiths College, University of London, UK
Rafael Pen~aloza
Amanda Vizedom
Securboration, USA
Fondazione Bruno Kessler, Trento, Italy
University of Toronto, Canada
Ulm University, Germany
University of Oviedo, Spain
Nuance Communications, USA
Wikimedia Germany, Germany
Politecnica de Madrid, Spain
University of Manchester, UK
University of Illinois, Urbana-Champaign, USA
University of S~ao Paulo, Brazil
Daniele Porello
Claudio Masolo
Antonio Lieto
John Bateman
Francesco Berto
Tarek Richard Besold
Massimiliano Carrara
Fabrice Correia
Roberta Ferrario
Marcello Frixione
Alessandro Giordani
Davide Grossi
Giancarlo Guizzardi
Maria M. Hedblom
Heinrich Herre
Gilles Kassel
Adila Alfa Krisnadhi
Emiliano Lorini
Kevin Mulligan
Alessandro Oltramari
Rafael Pen~aloza
Simon Scheider
Nicolas Troquard
Tuomas Tahko
Laure Vieu
Free University of Bozen-Bolzano, Italy
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
University of Turin, Italy
University of Bremen, Germany
University of Amsterdam, The Netherlands
City, University of London, UK
University of Padua, Italy
University of Neuch^atel, Switzerland
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
University of Genoa, Italy
Catholic University of the Sacred Heart, Milan, Italy
University of Liverpool, UK
Free University of Bozen-Bolzano, Italy
Otto von Guericke University Magdeburg, Germany
University of Leipzig, Germany
Universite de Picardie - Jules Vernes, France
University of Indonesia, Depok, Indonesia
Institut de Recherche en Informatique de Toulouse (IRIT-CNRS),
France
University of Geneva, Switzerland
Bosch Research and Technology Center, Pittsburgh, USA
Free University of Bozen-Bolzano, Italy
Utrecht University, The Netherlands
Free University of Bozen-Bolzano, Italy
University of Helsinki, Finland
Institut de Recherche en Informatique de Toulouse (IRIT-CNRS),
France
Emilio M. San lippo
Laura Daniele
Giorgio Colombo
Bob Young
Aleksandra Sojic
Zahid Usman
Walter Terkaj
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
Netherlands Organisation for Applied Scienti c Research (TNO),
The Netherlands
Polytechnic University of Milan, Italy
Loughborough University, UK
Institute of Biomedical Technologies (ITB-CNR), Milan, Italy
Coventry University, UK
Institute of Industrial Technologies and Automation (ITIA-CNR),
Bari, Italy
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
University of Toronto, Canada
Japan Advanced Institute of Science and Technology, Japan
Polytechnic University of Valencia, Spain
University Jaume I, Spain
University of Trento, Italy
Federal University of Espirito Santo, Brazil
Technical University of Madrid (UPM), Spain
Dutch Techcentre for Life Sciences (DTL), The Netherlands
Antony Galton
Fabian Neuhaus
Stefano Borgo
Maureen Donnelly
Roberta Ferrario
Pierre Grenon
Michael Gruninger
Nicola Guarino
Oliver Kutz
Frank Loebe
Riichiro Mizoguchi
Barry Smith
Laure Vieu
University of Exeter, UK
Otto von Guericke University Magdeburg, Germany
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
SUNY Bu alo, USA
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
University College London, UK
University of Toronto, Canada
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
Free University of Bozen-Bolzano, Italy
University of Leipzig, Germany
Japan Advanced Institute of Science and Technology, Japan
SUNY Bu alo, USA
Institut de Recherche en Informatique de Toulouse (IRIT-CNRS),
France
Maria M. Hedblom
Mihailo Antovic
Oliver Kutz
Otto von Guericke University Magdeburg, Germany
University of Nis, Serbia
Free University of Bozen-Bolzano, Italy
University of Bremen, Germany
University of Leeds, UK
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
Zurich University of Applied Sciences at Winterthur, Switzerland
University of Exeter, UK
University of Erfurt, Germany
Otto von Guericke University Magdeburg, Germany
University of Navarra, Spain
Arti cial Intelligence Research Institute (IIIA-CSIC), Bellaterra, Spain
Case Western Reserve University, Cleveland, USA
University College Dublin, Ireland
University of Chicago, USA
Martin Boeker
Heinrich Herre
Ludger Jansen
Frank Loebe
Daniel Schober
University of Freiburg, Germany
University of Leipzig, Germany
University of Rostock and Ruhr University Bochum, Germany
University of Leipzig, Germany
Leibniz Institute of Plant Biochemistry (IPB), Halle (Saale), Germany
Sherbrooke University, Canada
University of Freiburg, Germany
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
University of Murcia, Spain
Federal University of Pernambuco (UFPE), Brazil
University of Birmingham, UK
University of Leipzig, Germany
University of Leipzig, Germany
University of Florida, USA
King Abdullah University of Science and Technology, Saudi Arabia
University of Rostock and Ruhr University Bochum, Germany
University of Cape Town, South Africa
University of Leipzig, Germany
University of Leipzig, Germany
Newcastle University, UK
HITS gGmbH, Heidelberg, Germany
Otto von Guericke University Magdeburg, Germany
Federal Institute for Risk Assessment, Berlin, Germany
University of Paderborn, Germany
Insight Centre for Data Analytics, Galway, Ireland
Leibniz Institute of Plant Biochemistry (IPB), Halle (Saale), Germany
Monash University, Melbourne, Australia
Medical University Graz, Austria
Institute of Biomedical Technologies (ITB-CNR), Milan, Italy
Saarland University Medical Center, Germany
Elsevier, Amsterdam, The Netherlands
University of Rostock, Germany
Rossella Stufano
Inge Hinterwaldner
Stefano Borgo
Kris Krois
Oliver Kutz
Mara Abel
Mihailo Antovic
Tarek Besold
Dino Borri
Domenico Camarda
Emilios Cambouropoulos
Klaus Gasteier
Chiara Ghidini
Franca Giannini
Giancarlo Guizzardi
Inge Hinterwaldner
Kris Krois
Oliver Kutz
Frieder Nake
Omar Nasim
Paulo E. Santos
Angelika Seppi
Rossella Stufano
Politecnico di Bari, Italy
Humboldt University of Berlin, Germany
Laboratory for Applied Ontology, ISTC-CNR, Trento, Italy
Free University of Bozen-Bolzano, Italy
Free University of Bozen-Bolzano, Italy
Universidade Federal do Rio Grande do Sul, Brazil
University of Nis, Serbia
University of Bremen, Germany
Politecnico di Bari, Italy
Politecnico di Bari, Italy
Aristotle University of Thessaloniki, Greece
Universitat der Kunste Berlin, Germany
Fondazione Bruno Kessler (FBK), Trento, Italy
Institute for Applied Mathematics and Information Technologies
(IMATI-CNR), Rome, Italy
Free University of Bozen-Bolzano, Italy
Humboldt University of Berlin, Germany
Free University of Bozen-Bolzano, Italy
Free University of Bozen-Bolzano, Italy
University of Bremen, Germany
University of Regensburg, Germany
Centro Universitario FEI, Brazil
Humboldt University of Berlin, Germany
Politecnico di Bari, Italy
Kemo Adrian
Jero^me Euzenat
Dagmar Gromann
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
INRIA &amp; University Grenoble Alpes, France
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
University of Leeds, UK
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
DFKI, Saarbrucken, Germany
Jonkoping University, Sweden
Fair eld University, USA
Heriot-Watt University Edinburgh, UK
University of Leipzig and University of Paderborn, Germany
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
University of Edinburgh, UK
Tufts University, Medford, USA
Arti cial Intelligence Research Institute (IIIA-CSIC), Barcelona, Spain
Informatica Trentina, Trento, Italy
Sony Computer Science Laboratories Inc., Tokyo, Japan
ILLC, University of Amsterdam, The Netherlands</p>
      </sec>
    </sec>
  </body>
  <back>
    <ref-list>
      <ref id="ref1">
        <mixed-citation>
          <article-title>1The rst JOWO edition was `Episode 1: The Argentine Winter of Ontology', held in Buenos Aires, Argentina, in co-location with the 24th</article-title>
          <source>International Joint Conference on Arti cial Intelligence|IJCAI</source>
          <year>2015</year>
          .
          <article-title>The proceedings of JOWO 2015 appeared as volume 1517 of CEUR</article-title>
          , see http://ceur-ws.
          <source>org/</source>
          Vol-
          <volume>1517</volume>
          /.
          <article-title>The second JOWO edition was `Episode 2: The French Summer of Ontology', held in Annecy, France, in co-location with the 9th</article-title>
          <source>International Conference on Formal Ontology in Information Systems|FOIS</source>
          <year>2016</year>
          .
          <article-title>The proceedings of JOWO 2016 appeared as volume 1660 of CEUR</article-title>
          , see http://ceur-ws.
          <source>org/</source>
          Vol-
          <volume>1660</volume>
          /.
        </mixed-citation>
      </ref>
      <ref id="ref2">
        <mixed-citation>
          <article-title>2A more detailed description of these workshops can be found below</article-title>
          .
        </mixed-citation>
      </ref>
      <ref id="ref3">
        <mixed-citation>3See http://creol2017.di.unito.it/</mixed-citation>
      </ref>
      <ref id="ref4">
        <mixed-citation>
          4See https://smart.inf.unibz.it/index.php/
          <year>2017</year>
          /05/15/dao2017/
        </mixed-citation>
      </ref>
      <ref id="ref5">
        <mixed-citation>5See http://iaoa.org/jowo/dew2017/</mixed-citation>
      </ref>
      <ref id="ref6">
        <mixed-citation>6See http://www.loa.istc.cnr.it/workshops/epinon2017/home.html</mixed-citation>
      </ref>
      <ref id="ref7">
        <mixed-citation>7See http://www.loa.istc.cnr.it/workshops/FOMI2017/home.html</mixed-citation>
      </ref>
      <ref id="ref8">
        <mixed-citation>8See http://foust.inf.unibz.it/foust2/</mixed-citation>
      </ref>
      <ref id="ref9">
        <mixed-citation>
          9See http://isd.inf.unibz.
          <source>it SHAPES 4</source>
          .
          <article-title>0 { THE SHAPE OF THINGS</article-title>
        </mixed-citation>
      </ref>
    </ref-list>
  </back>
</article>