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  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>Tags and Dependencies: an Integrated View of Document Annotation</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Clemens Beckstein</string-name>
          <email>beckstein@minet.uni-</email>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Harald Sack</string-name>
          <email>sack@minet.uni-jena.de</email>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Heiko Peter</string-name>
          <email>hpeter@minet.uni-</email>
          <xref ref-type="aff" rid="aff2">2</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Institut für Informatik, University of Jena</institution>
          ,
          <addr-line>D-07743 Jena</addr-line>
          ,
          <country country="DE">Germany</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>Institut für Informatik, University of Jena</institution>
          ,
          <addr-line>D-07743 Jena</addr-line>
          ,
          <country country="DE">Germany</country>
        </aff>
        <aff id="aff2">
          <label>2</label>
          <institution>Institut für Informatik, University of Jena</institution>
          ,
          <addr-line>D-07743 Jena</addr-line>
          ,
          <country country="DE">Germany</country>
        </aff>
      </contrib-group>
      <abstract>
        <p>Metadata provided by annotations are an essential prerequisite for the realization of the semantic web. The manifold of metadata uses on the other hand also implies an abundance of different annotation types and formats, each requiring a different semantic treatment of the data. For semantically rich documents this results in a hybrid mixture of metadata about one and the same document. Further metadata diversity arises, if more than one author contributes to the annotation as it is typical for the now popular social tagging systems. Documents however, despite this heterogeneity show common structural properties that can be classified as logical, conceptual, and referential. There are intrinsic dependencies within and across those structures that have to be made explicit. We argue that the dependency structure as an explicit annotation is essential for any semantically rich document in order to be better understandable not only for man but also for machine.</p>
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>1. INTRODUCTION</title>
      <p>
        The Semantic Web holds promises for an intelligent
organization of and a selective access to a huge, world wide
distributed store of information by providing standard means
of formulating and distributing metadata in a way
accessible to machines. Metadata are structured, encoded data
that describe characteristics of information-bearing entities,
as e.g., documents [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ]. Metadata can be connected to
documents by annotations. We distinguish between annotations
of the document’s author, as e.g., annotations that define
the logical document structure, and annotations given by
the document’s user, as e.g., referential annotations or
descriptive keywords provided by collaborative tagging
systems. Users of documents range from casual readers to
software agents that process documents on their way through
the network. The success of the Semantic Web relies on the
proper annotation of its information resources. For this
reason, a lot of effort is spent on tools for the annotation of
existing resources as well as resource authoring tools that
provide annotation facilities.
      </p>
      <p>Many information-bearing resources comprise complex
annotation that can only be fully exploited if it is related to
annotation from associated external documents. We claim
that in order to cope with the corresponding heterogeneous
annotation structure an integrated view of document
annotation is mandatory. Despite of this heterogeneity
documents show common structural properties. They can be
classified according to their logical, conceptual, and
referential characteristics. There are intrinsic dependencies within
each of the three structures and also across them. These
dependencies have to be made explicit in order to facilitate
cross annotation reasoning that is necessary in order to make
full use of the information stored in the documents.
The paper is structured as follows: Section 2 describes our
integrated view of document annotation and shows possible
applications. Section 3 then gives reference to related work
and Section 4 concludes the paper with an outlook on future
work.
2.</p>
    </sec>
    <sec id="sec-2">
      <title>TYPES OF ANNOTATION AND THEIR</title>
    </sec>
    <sec id="sec-3">
      <title>DEPENDENCIES</title>
    </sec>
    <sec id="sec-4">
      <title>2.1 Documents, Tags and Annotations</title>
      <p>
        From an abstract point of view a document is just a plain,
totally ordered string of individually addressable document
tokens. These tokens form the smallest units of the
document that can be addressed by its very position in the
document. The document string typically is interspersed
with so called tags that are added to the document by its
author and the other users. Tags come in different types
corresponding to different uses of the tagged document parts.
Their primary function is to associate distinguished parts
of the document with metadata that are specific for these
parts and can be put to use by processes that operate on
them. Tags also carry information about their creators and
thus enable personalized views on the document. In the
following we will denote both individual tags as well as groups
of tags that semantically belong together as annotations.
The most prominent example of a document is the text
document, e.g. a textbook. The tokens of text documents are
words and other document units like figures that are
considered to be atomic. Structural tags are used to form higher
level document units, as e.g., sentences from words,
paragraphs from sentences, or chapters from sections. Another
example are video documents. Video data can be encoded
according to the MPEG standard [
        <xref ref-type="bibr" rid="ref6">6</xref>
        ]. There, the single
pixels of a video frame as being the smallest addressable units
can be considered as tokens. Pixels can be arranged within
blocks that again are subsumed into macro blocks.
Additionally, the MPEG-4 standard allows the definition of
distinguished objects that can be arranged within a scene.
Recently, collaborative tagging systems (CTS) have become
increasingly popular for annotating any kind of ressources.
In CTS the user assigns tags to specific resources with the
purpose of identification and reference. If the tags being
assigned by other users are considered as well, resources might
be discovered serendipitously by so called ”tag browsing”
[
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. CTS enable additional annotations that in difference to
traditional authoring systems are provided by the users and
not by the author.
      </p>
      <p>Documents can be structured along three dimensions: they
exhibit a logical, a conceptual, and a referential structure.
These structures are induced by the linear flow of the
smallest document units, by the semantics underlying the
document tags, and by the dependencies that exist between these
tags. They are therefore determined not only by the author
but by all the programs or persons that process the
document and add their own specific tags to it.</p>
    </sec>
    <sec id="sec-5">
      <title>2.2 The Logical Structure</title>
      <p>The logical structure of a document captures the part-of
structure of the document units defined by the tags and
reflects the total order of the smallest document units. From
an abstract point of view it is just an ordered tree. The
nodes of this tree represent document units. The link
between a child node and its parent node reflects the fact that
the child node represents a document unit which is a
direct constituent of the parent’s document unit. The order
of the tree follows from the total order of the smallest
document units: for any two nodes n1 and n2 on the same
level of the tree, n1 precedes n2 whenever all the smallest
document units belonging to n1 are located before all the
smallest document units belonging to n2 in the document
string. Different views held by different tag creators in
general represent different logical structures of the document.
But all the part-of relationships of these structures will be
compatible with the logical structure of the total order of
the token stream.</p>
      <p>Structural tags need not always be specified explicitly, as
e.g. by the delineation of a chapter in a book via a
corresponding mark up. They may also be present just implicitly
via the format or layout of the document—like the word
boundary (via punctuation and white space) or the scope
of a paragraph (via a separating line) in a text. Explicitly
specified structural tags usually define not only a higher level
document unit but also a name for this unit—e.g. a short,
summarizing title for a book chapter—that is meaningful to
the person that added the tag to the document.
The part-of tree along with explicit or implicit names for the
document units can be used for document navigation since
it gives rise to complex absolute and relative addresses. The
absolute address of a document unit is given by the shortest
path from the root of the part-of tree to this document unit.
The relative address of a document unit u2 wrt. to a higher
level document unit u1, which it is part of, is given by the
path leading down from u1 to u2. The ability to
systematically form complex addresses of document units is essential
for the referential structure of a document.</p>
      <p>
        An interesting complex annotation can be derived from the
logical structure and the explicit structural tags of a
document by traversing the corresponding ordered part-of tree
starting at the root, depth-first and left-to-right, until a
given level of document granularity is reached. Collecting
the names and addresses of the document nodes belonging
to the visited nodes results in the familiar hierarchical
organized list known as table of contents (TOC). For text
documents the list elements of course correspond to headings
of document units and the addresses to page numbers
starting the respective units. In analogy to the TOC for video
documents an annotated list of consecutive video segments
(scenes or chapters) can be considered. Video segments can
be identified automatically within the MPEG-4 encoding of
the video data, while annotations describing the video
segment can be extracted from MPEG-7 metadata [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ]. In the
same way as the author of a text document identifies a
section by putting a numbered heading on top of that section,
the author of a video document can mark up a video segment
by adding a MPEG-7 scene description.
      </p>
    </sec>
    <sec id="sec-6">
      <title>2.3 The Conceptual Structure</title>
      <p>
        Documents also exhibit a conceptual structure which can
be considered as its ontological skeleton [
        <xref ref-type="bibr" rid="ref5">5</xref>
        ]. The conceptual
structure captures all the concepts that are subject of the
document along with the predominant relationships holding
between them. One important example for a relationship
between two concepts is concept subsumption. This
relation allows to automatically generate terminologies ranging
from simple flat ones like glossaries to complex ones like
sophisticated concept hierarchies.
      </p>
      <p>
        The author and other users of a document usually
specify only a small fragment of the conceptual structure of a
document via tags. Most of the conceptual structure is
contained only implicitly in the document and requires natural
comprehension in order to be made explicit. For this
explication key units of the document have to be identified and
associated with the (names of) concepts applying to them.
The resulting concepts then have to be related to each other
and to concepts of other documents by further annotations
until a rich enough fragment of the document’s conceptual
structure is uncovered. For this process again the referential
structure of the document is an important resource.
Tags that contribute to the conceptual structure of a
document can range from very simple, as e.g. index entries,
to highly complex structured ones. Index entries explicitly
specify both the association of the document unit with a
concept as well as the exact position of the involved
concept names. An indexing process can then combine the
tags from the logical and the explicated conceptual
structure of the document to derive another complex document
annotation—the familiar hierarchical list of concepts along
with their occurrences, which is called the document’s
index. Computational tools that take into account general
knowledge about indexing and document related ontologies
can considerably improve the overall quality of a document’s
index [
        <xref ref-type="bibr" rid="ref10">10</xref>
        ].
      </p>
      <p>
        In analogy to index entries, for video data MPEG-7
descriptions can be used to annotate video segments with
conceptual information. In a limited way even an automated
annotation with conceptual information is already possible:
Automated annotation tools are able to identify cut points
between consecutive scenes and to supply visual descriptions
on different levels of abstraction [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ]. The transcription of
the audio content that is part of the video data can also
serve as a basis of conceptual content annotation [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ].
Conceptual annotation of course can be much more
complex than the provision of a list of index entries, where both
the identification of a concept and the relationship between
two or three concepts is determined by a single tag. It
usually requires both tags that just associate document units
with concept (names) and a formal language that allows to
express the relationships between the concepts named this
way. Languages suitable for this annotation task can be
very complex and even be undecidable as the family of Web
Ontology Languages shows [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ].
      </p>
    </sec>
    <sec id="sec-7">
      <title>2.4 The Referential Structure</title>
      <p>The third important structure that a document exhibits is
its referential structure. The cross reference relation of a
collection of documents is defined as the set of all pairs (u1, u2)
of documents units, where document unit u1 mentions
document unit u2. If u1 and u2 belong to the same document,
then the pair (u1, u2) is called an internal link from u1 to
u2; otherwise it is called an external link.</p>
      <p>The cross reference relation of a collection of documents can
be visualized as a directed graph, where the nodes represent
document units and the directed arcs the links existing
between them. Whenever there is a directed path in this graph
leading from a document unit u1 to another document unit
u2 then this suggests that the concept being expressed in
u1 is in some sense dependent on the concept u2 is about.
What kind of dependency is meant exactly depends on the
types and contents of the documents involved.</p>
      <p>Usually only a small part of the referential structure of a
document collection is specified via tags. As for the
conceptual structure, most of it is contained just implicitly in
the involved document units and would require a deeper
understanding of the respective document parts in order to be
made explicit. An author or other user of the document
collection can add a link (u1, u2) to a document unit u1 by
placing a tag somewhere in u1 that contains an address
referring to u2, which is formed in accordance with the logical
structure of the document containing u2.</p>
      <p>Internal references of a text document refer to document
units like footnotes, other chapters, or figures. Familiar
examples of external references of text documents are links to
other documents or part of them. It is also typical for
complex text documents that the referential tags belonging to
different sorts of cross linked document units are compiled
into complex referential annotations like the table of figures,
the list of endnotes, the list of notes, or the list of external
links known under the familiar name “references”.</p>
    </sec>
    <sec id="sec-8">
      <title>2.5 The Structures in Concert</title>
      <p>The logical, the conceptual, and the referential structure
taken together open up new kinds of annotation based
document applications that would not be possible by just using
one of them in isolation.</p>
      <p>A prime example of such an application is a computer
generated reading tour through a collection of documents, which
reflects the metadata from the authors and the tagging
information provided by the community of the users of these
documents. Simultaneously, such a tour, e.g., could be used by
an e-learning system to automatically generate a sequence
of learning units that have been identified as relevant for a
course and that were previously semantically annotated for
this purpose by a human teacher. Another, simpler use of a
tour, for the users of a single but complex document, would
be the suggested reading (dependency) graph as it is found
in the introduction of certain voluminous textbooks. For
a sound tour document units that—according to their
referential structure—are dependent on each other should be
visited only after the ones they depend on. The suggested
reading tour should also guarantee that concepts document
units in later parts of the tour are about should have been
defined earlier in the tour. This can be achieved with the
help of the conceptual structures of the collection. Finally,
the default order on document units at the same level of the
logical structures of candidate documents for the tour can
be used to constrain the reading order, where no conceptual
or referential dependency determines their precedence.
The documents’ logical and conceptual structures together
also provide a basis for a goal-oriented selection of document
units for the reading tour. The conceptual structures can be
used to collect the relevant document units, i.e. those that
are mandatory to cover all the concepts the user is interested
in. The logical structures of the candidate documents then
can be used to keep the size of the relevant documents units
as small and concise as the part-of relation of the involved
documents permits. User provided annotations also allow
the generation of personal tours tailored to the information
needs of different users.</p>
      <p>Another application dependent on an integrated view of
document annotation is collaborative authoring. For this
application the logical and the conceptual structures of the
involved documents have to be merged. Obviously,
considering only logical and conceptual dependencies within the
single documents will not be sufficient—cross document
dependencies have to be taken into account.</p>
    </sec>
    <sec id="sec-9">
      <title>3. RELATED WORK</title>
      <p>
        We are not the first to recognize that the different metadata,
i.e. the different sources of knowledge about a semantically
rich document or group of documents that are provided by
the authors and users each exhibit intrinsic structure and
depend on each other. They form what is called a hybrid
representation in the field of knowledge representation [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ].
The key problem with hybrid knowledge representation
formalisms is to guarantee that reasoning processes operating
on hybrid knowledge structures do not only reasonable work
wrt. the individual knowledge types but also across the
borders of different knowledge types.
      </p>
      <p>
        Topic Maps [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ], e.g., are a knowledge representation
formalism that attempts to express (aspects) of hybrid structures
of this kind. They combine a semantic net like conceptual
representation with a reference structure for the resources
that this semantic net is about. Topic Maps could
therefore provide a basis for the representation of the conceptual
and referential structure of a document. They miss
however dedicated means for the representation of the logical
structure of a document. In addition they do not even
guarantee that processes operating on the conceptual or
referential structure alone behave according to their underlying
semantics—two deficiencies they share with early semantic
nets [
        <xref ref-type="bibr" rid="ref14">14</xref>
        ].
      </p>
      <p>
        Topic Maps also do not answer the question of how to
design annotation that is suitable for a given collection of
documents. But there are a number of other tools, which support
this by uncovering parts of a document’s structure. Well
known representatives are automatic document annotation
systems that attempt to extract the conceptual structure of
a document using information retrieval techniques. E.g., in
[
        <xref ref-type="bibr" rid="ref12">12</xref>
        ] the video recording of a lecture is synchronized with the
lecturer’s presentation to extract semantic annotation that
is utilized for a content based search within the video data.
In [
        <xref ref-type="bibr" rid="ref10">10</xref>
        ] we describe an approach that combines general
knowledge about indexing, document related ontologies, and
structural knowledge about a given single text document for the
computer supported generation of a high quality document
index. The corresponding SmartIndexer system internally
uses a directed graph—the so called Index Graph—that
shares structural resemblances with Topic Maps. The
Index Graph is layered into two subgraphs: a structure graph
and a document graph. The structure graph represents
certain aspects of the conceptual and referential structure and
the document graph the logical structure for the document
to be indexed. Another approach that uses a part of the
conceptual structure of a document for indexing purposes is
documented in the work of Shabajee et al. [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ]. They
propose a system that supports the automated annotation of
multimedia database indexes utilising extensible controlled
vocabularies. Their approach distinguishes users by their
level of expertise and integrates an according rights
management.
      </p>
    </sec>
    <sec id="sec-10">
      <title>4. CONCLUSION</title>
      <p>We have shown that document collections despite their
semantical heterogeneity possess intrinsic logical, referential,
and conceptual characteristics and that complex
dependencies exist within and across the document structures
carrying these characteristics. We have also argued that these
characteristics as well as their interdependencies have to
be made explicit and should be maintained along with the
documents that carry the underlying metadata. The
corresponding dependency structure can not only be rather useful
for text documents, as we have sketched in this paper, but
also for other types of documents.</p>
      <p>Adequately processing heterogeneous document collections
based on their distributed and hybrid metadata—by the
very nature of this endeavour—requires the explicit
maintenance of the annotation structures of the involved
documents along with the dependencies that exist between them.
Difficult as this is, it does promise to open up the door to
new and exciting applications that seem to be impossible
without.</p>
    </sec>
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