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  <front>
    <journal-meta />
    <article-meta>
      <title-group>
        <article-title>An Ontology-Enabled Approach For User-Centered and Knowledge-Enabled Explanations of AI Systems</article-title>
      </title-group>
      <contrib-group>
        <aff id="aff0">
          <label>0</label>
          <institution>Rensselaer Polytechnic Institute</institution>
          ,
          <addr-line>Troy NY 12180</addr-line>
          ,
          <country country="US">USA</country>
        </aff>
      </contrib-group>
      <abstract>
        <p>Explainable Artificial Intelligence (AI) focuses on helping humans understand the working of AI systems or their decisions and has been a cornerstone of AI for decades. Recent research in explainability has focused on explaining the workings of AI models or model explainability. There have also been several position statements and review papers detailing the needs of end-users for user-centered explainability but fewer implementations. Hence, this thesis seeks to bridge some gaps between model and user-centered explainability. We create an explanation ontology (EO) to represent literature-derived explanation types via their supporting components. We implement a knowledge-augmented question-answering (QA) pipeline to support contextual explanations in a clinical setting. Finally, we are implementing a system to combine explanations from diferent AI methods and data modalities. Within the EO, we can represent fifteen diferent explanation types, and we have tested these representations in six exemplar use cases. We find that knowledge augmentations improve the performance of base large language models in the contextualized QA, and the performance is variable across disease groups. In the same setting, clinicians also indicated that they prefer to see actionability as one of the main foci in explanations. In our explanations combination method, we plan to use similarity metrics to determine the similarity of explanations in a chronic disease detection setting. Overall, through this thesis, we design methods that can support knowledge-enabled explanations across diferent use cases, accounting for the methods in today's AI era that can generate the supporting components of these explanations and domain knowledge sources that can enhance them.</p>
      </abstract>
      <kwd-group>
        <kwd>Explainable AI</kwd>
        <kwd>Knowledge-Enabled Explanations</kwd>
        <kwd>UserCentered Explanations</kwd>
      </kwd-group>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>Introduction and Problem statement</title>
      <p>Artificial Intelligence (AI) has evolved over the years from having limited
applications in application domains such as the military to having more widespread
use to being available to assist humans in both high-precision tasks such as
healthcare and financial decisions to more everyday tasks such as helping in web
search, weather alerts to navigation. Through these applications and
improvements in computing and AI technology, AI methods have evolved to support the
various applications and better computing infrastructure. Also, through these AI
evolutions, diferent approaches have emerged, from rule-based expert systems
to pattern-based machine learning (ML) and deep learning methods.</p>
      <p>
        As humans, we tend to trust AI better if we can understand the reasoning of
how the AI came to a decision or connect an AI decision to what we are
familiar with [
        <xref ref-type="bibr" rid="ref21">21</xref>
        ] [
        <xref ref-type="bibr" rid="ref15">15</xref>
        ]. Understandably so, explainability or explainable AI (XAI) has
been one of the earliest conceived thrusts of what we know today as Trustworthy
AI [
        <xref ref-type="bibr" rid="ref20">20</xref>
        ], from early works such as Mycin [
        <xref ref-type="bibr" rid="ref19">19</xref>
        ] that were developed to explain an
expert system in a medical setting to today the plethora of post-hoc
explainability methods that provide reasoning for features that were found to be crucial by
somewhat opaque ML models. The needs for explainability are diverse and are
evolving in the changing AI landscape [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ] [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ]. For example, as humans, we
reason through diferent paths before we trust a decision, i.e., explanations can be
multi-dimensional. Additionally, explanations are typically reactive to user
questions [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ] [
        <xref ref-type="bibr" rid="ref10">10</xref>
        ] [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ], and often have multiple forms and types such as the what ifs or
counterfactuals, what evidence or scientific and what data or data-based [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ] [
        <xref ref-type="bibr" rid="ref16">16</xref>
        ].
      </p>
      <p>
        In recent times, given the increase in complexity of AI and ML methods;
much of the explainability research has focused on model explanations [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ] [
        <xref ref-type="bibr" rid="ref17">17</xref>
        ]
alone. However, several researchers [
        <xref ref-type="bibr" rid="ref15">15</xref>
        ] [
        <xref ref-type="bibr" rid="ref16">16</xref>
        ] [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ] have posited the need for
conversational user-centered explainability beyond model explanations alone, which
is of multiple types and supported by various sources such as data, knowledge,
and context. Many publications in user-centered explainability have either been
position statements [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ] [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ] [
        <xref ref-type="bibr" rid="ref15">15</xref>
        ] or survey papers [
        <xref ref-type="bibr" rid="ref24">24</xref>
        ], with fewer implementations
that can be applied across use cases [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ]. Hence, there are opportunities within
explainable AI to support user-centered explanations that build from diferent
data sources and AI methods and can address a range of user questions. Upon
laying out the research questions that can tackle some of these gaps (Sec. 2), I
will describe the contributions (Sec. 2.2) we have made; focusing on methods we
use or plan to use to support these contributions and then describing the results
(Sec. 3) thus far from them.
2
2.1
      </p>
    </sec>
    <sec id="sec-2">
      <title>Research Questions and Contributions</title>
      <sec id="sec-2-1">
        <title>Research Questions</title>
        <p>This thesis hopes to address the following research questions in the evolving field
of user-centered explainable AI:
– How can we formally represent explanations with support for interacting AI
systems, additional data sources, and along diferent dimensions?
– How useful and feasible are such explanations for clinical settings?
– Is it feasible to combine explanations from multiple data modalities and AI
methods?</p>
      </sec>
      <sec id="sec-2-2">
        <title>Contributions and Methods</title>
        <p>
          Here are the contributions that address the previously listed research questions.
– Explanation Ontology: We design an Explanation Ontology (EO), a
generalpurpose semantic representation that can represent fifteen diferent
literaturederived explanation types via their system-, interface- and user- related
components [
          <xref ref-type="bibr" rid="ref6">6</xref>
          ]. We showcase the utility of the EO’s model to represent
explanation types across six diferent use cases ranging from domains of finance,
food to healthcare. We design competency questions that our target
enduser, a system developer, would ask when using the EO. Further, we have
released two versions of the EO with, with added support for an
evolving hybrid AI landscape by by including a wider range of commonly used
explainer methods in EO V2.0. The EO is open-sourced and available at:
https://tetherless-world.github.io/explanation-ontology/index.
– Contextualizing Model Explanations via a Knowledge Augmented
QuestionAnswering Method: We design a clinical question-answering (QA) system to
address questions from clinical practice guidelines (CPGs) to provide
contextual explanations to help clinicians interpret risk prediction scores and
their post-hoc explanations in a comorbidity risk prediction setting [
          <xref ref-type="bibr" rid="ref5">5</xref>
          ]. We
refined the use case in consultation with a clinician. We identified
dimensions of interest in the use case, along with which contextual explanations
would be helpful for clinicians to interpret the risk scores and patient
features better - patient, their predicted risk and post-hoc explanations of their
risk. From an implementation standpoint, we developed a QA framework
to extract and support contextual explanations from CPGs. We leverage
large language models (LLMs) and their clinical variants for the QA and
build knowledge augmentations (KAs) to improve the semantic coherence
of the answers to the questions. We conduct a quantitative evaluation to
demonstrate the QA’s eficacy and a qualitative evaluation with clinicians
to understand if contextual explanations are helpful and where else they
would require support to use them in their practice.
– A Method to Combine Multiple Explanations: We are designing a
generalpurpose framework capable of providing multiple explanations to an end-user
question (e.g., that of a clinician). Within the framework, we want to break
down a user question into sub-questions that can be addressed by diferent
explanation types either those supported by diferent explainer methods or
diferent data modalities. As a second step, we are developing a method
to combine explanations if they supplement each other and leave them as
is if not. Overall, we hope to generate natural language explanations from
their individual data, knowledge, and method output components. We plan
to evaluate the explanations via small-scale user studies and use / suggest
metrics [
          <xref ref-type="bibr" rid="ref27">27</xref>
          ] that the XAI community has proposed or will benefit from.
        </p>
      </sec>
    </sec>
    <sec id="sec-3">
      <title>Results and Evaluations</title>
      <p>3.1</p>
      <sec id="sec-3-1">
        <title>Explanation Ontology</title>
        <p>
          We demonstrate how the EO can represent explanations via their dependencies
in six diferent use cases (Fig. 1), where explanations are generated by either
IBM’s AIX-360 suite of explainer methods [
          <xref ref-type="bibr" rid="ref2">2</xref>
          ] or via other self-explainable
logical reasoners (i.e., food and drug recommendation use cases). Upon running a
reasoner on these use case knowledge graphs (KGs), we can also infer
diferent explanation types supported within the EO, making it possible for system
designers to generate various explanation types within their use cases.
Furthermore, we borrow ontology evaluation techniques from Muhammad et al. [
          <xref ref-type="bibr" rid="ref1">1</xref>
          ] and
adopt three diferent evaluation strategies from their paper, i.e., evolution-based
evaluation to highlight the benefits of the additions made in EO V2.0, task-based
evaluation to demonstrate what general support system designers can expect to
seek when exploring EO or planning to use EO in their use cases and
applicationbased evaluation to indicate what kinds of questions can be asked around EO
supported use case KGs. Our published papers on the EO [
          <xref ref-type="bibr" rid="ref6">6</xref>
          ] can provide more
details on our assessment and results.
We implement our QA pipeline to support contextual explanations in the risk
prediction of a comorbidity of type-2 diabetes - chronic kidney disease (CKD).
We extract content from the then current edition of the type-2 diabetes CPG
or American Diabetes Association (ADA) 2021 CPG [
          <xref ref-type="bibr" rid="ref4">4</xref>
          ]. We provide
contextual explanations for five diferent question types including questions about the
patient’s diabetes and risk summaries, questions about important features
contributing to their risk (typically found to be other diseases they have) and their
medication and lab values. Each of these question types provide context for
different entities of interest, e.g., the patient’s risk summary contextualizes their
risk for CKD. Our KA QA pipeline provides answers to three of these
question types from the ADA CPG - feature importance questions, medications,
and lab value questions. For the KA settings of the QA, we leverage knowledge
from medical coding schemes - Snomed-CT and UMLS. We evaluate the
answers from the KA QA models via standard QA evaluation metrics (F1, mean
average precision (MAP) and recall) and find improvements in precision using
KAs to the LLMs (Fig. 2). We also perform additional analyses to understand if
any LLM architecture or KA strategy performs much better at certain disease
groups than others and we find that there are diferences in performance within
disease groups. Additionally, we categorize our conversations during the expert
panel sessions with clinicians into themes and sub-themes (Fig. 2); where they
indicated that they preferred support from explanations or would want to see
more support. During these sessions, we walked clinicians through contextual
explanations for prototypical patients on a risk prediction dashboard that we
developed. More details are available in our paper [
          <xref ref-type="bibr" rid="ref5">5</xref>
          ].
We are currently implementing methods to generate and analyze explanations
from diferent data modalities. We are evaluating this implementation in a
multimodality disease setting, such as the staging of CKD. We are generating
explanations for the patients’ genetics and their CT scans and we want to answer if
these explanations from two diferent data modalities complement / supplement
each other. We are using text similarity metrics as a start to evaluate the degree
of agreement of the explanations and might consider using other XAI metrics.
We are working towards completing this contribution within a year. Also, we are
submitting a patent disclosure on this work.
4
        </p>
      </sec>
    </sec>
    <sec id="sec-4">
      <title>Related Work</title>
      <p>
        We review related works in three diferent areas of contributions of this thesis
including representations of model explanations, support for contextual
explanations in clinical settings, and methods to combine explanations from various
sources and methods. There are two ontologies to represent explanations [
        <xref ref-type="bibr" rid="ref23">23</xref>
        ] [
        <xref ref-type="bibr" rid="ref22">22</xref>
        ],
one [
        <xref ref-type="bibr" rid="ref23">23</xref>
        ] focuses on the dependencies of explanations from the social sciences and
the philosophy domains (we include classes from their ontology in the EO) and
another [
        <xref ref-type="bibr" rid="ref22">22</xref>
        ] is a representation to support various explanation types in a specific
engineering architecture, but this ontology is not in the standard OWL format.
There have been papers [
        <xref ref-type="bibr" rid="ref25">25</xref>
        ] [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ] on the need to support contextual explanations in
an end-end setting where explanations provide context around entities of interest
in an implemented setting such as risk prediction. Still, the implementations are
few [
        <xref ref-type="bibr" rid="ref18">18</xref>
        ] [
        <xref ref-type="bibr" rid="ref26">26</xref>
        ]. Furthermore, the applications of LLMs to CPGs have been limited
to non-QA tasks such as natural language understanding and entity
recognition [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ]. Architectures to combine explanations from diferent data sources and
logical and statistical reasoners have been proposed and implemented in the
past [
        <xref ref-type="bibr" rid="ref14">14</xref>
        ], but not in today’s hybrid AI landscape. However, a few recent
papers propose or design methods to identify if feature-based explanations agree
or disagree with each other [
        <xref ref-type="bibr" rid="ref12">12</xref>
        ] and suggest building towards multi-input,
conversational explanations. Attempts to combine or support various user-centered
and natural language explanation types need to be improved, and hence there
are opportunities and need for the explanation framework.
5
      </p>
    </sec>
    <sec id="sec-5">
      <title>Conclusions</title>
      <p>We have described three contributions that together enable the generation of
explanations from various supporting components. The implementations for the
ifrst contribution, explanation ontology, and the last planned contribution are
kept general-purpose and use case agnostic. However, we focus the second
contribution on providing contextual explanations that ofer additional domain
knowledge to interpret model explanations and AI method results, in a clinical use
case. Still, our methods can be adapted to other literature-rich settings. In each
of our contributions, we leverage ontologies by building them ourselves or
repurposing and utilizing well-used domain ontologies and knowledge graphs (KGs)
in the field of use. This combination of neural and symbolic approaches within
our contributions to support explanations helps root the explanations in domain
knowledge, i.e., knowledge-enabled explanations and also makes the
explanations more easily interpretable by domain experts. We have presented themes
that clinicians indicated in their evaluation of our contextual explanations, and
these can help inform future goals that explanations should focus on. Further,
we have open-sourced the EO and have iterated through the ontology to
support more explanation types and use cases, making the resource more accessible
to our intended user group of system developers. Some of the themes from our
discussions with clinicians and our experience including ontologies and KGs in
explanations, can be valuable for discussion with other semantic web researchers.
Overall, this thesis strides towards allowing diferent explanation types to be
supported by a broad range of AI methods and knowledge sources while accounting
for user requirements, attempting to make explanations more user-centered and
multi-perspective.</p>
    </sec>
    <sec id="sec-6">
      <title>Acknowledgements</title>
      <p>This work is done as part of the HEALS project, and is partially supported by
IBM Research AI through the AI Horizons Network. I thank my advisor, Prof.
Deborah L. McGuinness and co-advisor, Prof. Oshani Seneviratne, whose inputs
and guidance greatly helped assist and shape this thesis.</p>
    </sec>
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