Vol-4000⫷ Vol-4001 ⫸Vol-4002
urn:nbn:de:0074-4001-X

Copyright © 2025 for the individual papers by the papers' authors. Copyright © 2025 for the volume as a collection by its editors. This volume and its papers are published under the Creative Commons License Attribution 4.0 International ( CC BY 4.0 ) .

SeWeBMeDa 2025
Semantic Web Solutions for Large-Scale Biomedical Data Analytics 2025

Proceedings of the 8th Workshop on Semantic Web solutions for large-scale biomedical data analytics
co-located with The ESWC 2025: Extended Semantic Web Conference ( ESWC 2025 )

Portorož, Slovenia, June 1, 2025 .

Edited by

Rita de Sousa ¹
Michel Dumontier ²
Dietrich Rebholz-Schuhmann ³
Ali Hasnain ⁴

¹ University of Mannheim , Data and web Science Group
² Maastricht University , Institute of Data Science
³ Information Centre for Life Sciences , ZB MED
⁴ University of Medicine and Health Science, Pharmacy and Biomolecular Sciences , Royal College of Surgeons in Ireland

Table of Contents

Preface
Summary: There were 14 papers submitted for peer-review to this workshop. Out of these, 5 papers were accepted for this volume, 5 as regular papers and 0 as short papers.

Session 1: Keynote

Knowledge Graphs for Explainable Scientific Discovery
Catia Pesquita

Session 2: Artificial Intelligence and Large Language Models for Healthcare and Life Sciences

AI based chatbots vs. traditional search: A systematic comparison of response quality for dementia management information
Sourav Maiti , Syeda Mah-e-Fatima , Qurratal Ain Fatimah , Ali Hasnain
Constructing CCEE an LLM evaluation dataset for Complex Context-aware Event Extraction for gene regulatory networks
Frederik Labonté , Lucie Flek
Using Clinical Guidelines, Domain Ontology, and LLMs for Personalized Leukemia Treatment Recommendations
Xingru Xu , Michel Dumontier , Chang Sun

Session 3: Healthcare and Life Sciences Data Similarity

LISE: a Logic-based Interactive Similarity Explainer
Simona Colucci , Francesco Maria Donini , Verdiana Schena

Session 4: Text, Data and Ontologies in Healthcare and Life Sciences

Can Language Models Align Biomedical Ontologies?: Evaluating Retrieval-Augmented Prompt Strategies in Bio-ML
Lucas Ferraz , Pedro Giesteira Cotovio , Catia Pesquita

2025-07-07: submitted by Rita Sousa, metadata incl. bibliographic data published under Creative Commons CC0
2025-07-21 : published on CEUR Workshop Proceedings (CEUR-WS.org, ISSN 1613-0073) | valid HTML5 |