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  <front>
    <journal-meta>
      <journal-title-group>
        <journal-title>Nara, Japan
$ allard.oelen@tib.eu (A. Oelen); auer@tib.eu (S. Auer)</journal-title>
      </journal-title-group>
    </journal-meta>
    <article-meta>
      <title-group>
        <article-title>TIB AIssistant: a Platform for AI-Supported Research Across Research Life Cycles</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Allard Oelen</string-name>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Sören Auer</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>L3S Research Center, Leibniz University of Hannover</institution>
          ,
          <addr-line>Hannover</addr-line>
          ,
          <country country="DE">Germany</country>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>TIB - Leibniz Information Centre for Science and Technology</institution>
          ,
          <addr-line>Hannover</addr-line>
          ,
          <country country="DE">Germany</country>
        </aff>
      </contrib-group>
      <pub-date>
        <year>2025</year>
      </pub-date>
      <volume>000</volume>
      <fpage>0</fpage>
      <lpage>0001</lpage>
      <abstract>
        <p>The rapidly growing popularity of adopting Artificial Intelligence (AI), and specifically Large Language Models (LLMs), is having a widespread impact throughout society, including the academic domain. AI-supported research has the potential to support researchers with tasks across the entire research life cycle. In this work, we demonstrate the TIB AIssistant, an AI-supported research platform providing support throughout the research life cycle. The AIssistant consists of a collection of assistants, each responsible for a specific research task. In addition, tools are provided to give access to external scholarly services. Generated data is stored in the assets and can be exported as an RO-Crate bundle to provide transparency and enhance reproducibility of the research project. We demonstrate the AIssistant's main functionalities by means of a sequential walk-through of assistants, interacting with each other to generate sections for a draft research paper. In the end, with the AIssistant, we lay the foundation for a larger agenda of providing a community-maintained platform for AI-supported research.</p>
      </abstract>
      <kwd-group>
        <kwd>eol&gt;AI Assistant</kwd>
        <kwd>AI-Assisted Research</kwd>
        <kwd>Scholarly Assistant</kwd>
        <kwd>Scholarly AI Platform</kwd>
      </kwd-group>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>1. Introduction</title>
      <p>
        The recent advancements of Artificial Intelligence (AI), in particular generative AI, such as Large
Language Models (LLMs), have a profound impact on our society already [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ]. Among other fields,
scholarly research is one of the areas where AI already has, and will likely even more in the future,
change how work is conducted [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ]. However, to fully leverage AI for research, the researcher needs to
be aware of the many diferent approaches and needs to have experience with guiding the LLM in such
a way that it produces outputs that are useful for their research. Especially due to the growing number
of tools, techniques, and approaches, it can be overwhelming and challenging to efectively leverage AI
for scholarly research.
      </p>
      <p>
        To address these challenges, we present the TIB AIssistant (i.e., AI-assistant). The TIB AIssistant is a
domain-agnostic AI-supported research platform that helps researchers, by means of AI, in various
steps of the research life cycle. This work demonstrates a concrete implementation of our vision of the
TIB AIssistant, which is published as a vision paper [
        <xref ref-type="bibr" rid="ref3">3</xref>
        ]. While the vision paper outlines a high-level list
of design principles and considerations, this article provides additional value by introducing a concrete
implementation of the AIssistant platform, a workflow of diferent assistants, and a demonstration of
the user interactions with the platform. We aim to provide support across the research life cycle by
means of diferent agents (hereafter called assistants). This ranges from providing guidance during
ideation, helping to share research questions, writing up articles, to publishing a paper. The assistants
take in certain inputs and generate specific outputs. If the assistants are used in sequence, generated
output is stored and are used as input for the next assistant. However, it is also possible to use the
assistants in isolation, i.e., to perform a single task. Assistants can use a predefined set of tools in any
arbitrary order to accomplish their tasks. Most of these tools are external services, called via REST
endpoints, and are called when deemed necessary by the LLM. For example, this makes it possible for
assistants to find related work via actual scholarly search platforms, or to find articles based on certain
.1
.4
.2
      </p>
    </sec>
    <sec id="sec-2">
      <title>2. Related Work</title>
      <p>
        The industrial revolution and afterward the digital revolution had a substantial impact on all aspects
of life [
        <xref ref-type="bibr" rid="ref5">5</xref>
        ]. The rise of AI is considered to be potentially even more impactful than the previous
revolutions [
        <xref ref-type="bibr" rid="ref6">6</xref>
        ]. Now with the rise of Generative AI, and specifically Large Language Models growing in
size, this impact of AI is rapidly accelerated [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ]. For example, LLMs are expected to have a significant
impact on the labor market [
        <xref ref-type="bibr" rid="ref8">8</xref>
        ]. Furthermore, LLMs have an impact on many other fields, including
medicine [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ], finance [
        <xref ref-type="bibr" rid="ref10">10</xref>
        ], and law [11]. LLMs have a significant impact on diferent aspects of scholarly
research as well, for example, for generating research ideas [12], literature reviews [13], and paper
writing [14]. To efectively use LLMs for such purposes, prompt engineering is of crucial importance [ 15].
The ability to write efective prompts becomes an important skill for professionals seeking to leverage
AI for their work [16]. To this end, with the TIB AIssistant, we provide a library of prompts (i.e., the
assistants) that have been manually curated and can be integrated directly inside research workflows.
      </p>
      <p>There are many individual approaches to leveraging LLMs for research. Some of these approaches
aim to create a fully automated research life cycle using AI. This includes the work of Sakana AI by
means of the AI Scientist, which fully automates the research life cycle by iteratively executing life
cycle phases [17]. There are several shortcomings of their approach, for example, the limited ability to
ifnd related literature, and issues during code generation leading to failing experiments [ 18]. While
fully automated approaches are an interesting research avenue and are surely going to be improved in
the near future, we take a diferent approach with the AIssistant. We believe that researchers must be
at the center of doing research, and therefore, AI should be an assistive technology, leaving the human
researcher in control of the process.</p>
    </sec>
    <sec id="sec-3">
      <title>3. Approach</title>
      <p>The AIssistant’s approach consists of three main components: assistants, tools, and assets. We will
discuss those concepts on a high level to lay the foundation for the platform.</p>
      <p>Assistants are agents that are designed to perform a single task. For example, formulating research
questions or coming up with a paper title. Assistants consist of a name, system prompt, LLM model,
what assets they consume and generate, and the tools that can be called. The LLM model selection
determines which model to use to accomplish the task. Simpler tasks can be performed by smaller
models, reducing the required resources and waiting time.</p>
      <p>Tools are generally external web services that are called via REST endpoints. The tools have a name,
a textual description, an input schema, and an execution function. The description and input schema
are provided to the LLM to provide instructions on when the tool should be called and how it should be
called. This is handled via the Tool Calling mechanism [19]. Each assistant specifies the tools that are
callable, which limits the space of possible tools and thus improves the tool selection accuracy. The
output of tools is either sent to the chat as text or handled by displaying specialized UI components.
This follows the paradigm of Generative UI, where UI components are shown on demand, depending on
the task at hand. In section 4, we demonstrate several implemented generative UI components.</p>
      <p>
        Assets are the data store that assistants can access. This difers from the conversation’s history
(i.e., context window) as it is structured and only contains data that the user selects. Assets have a
name and a data type (e.g., text, object, JSON, etc.). Assistants can have required input assets, which
either consist of previously generated assets or are manually provided by the user. Reproducibility is
one of the cornerstones of science. Therefore, being transparent about how AI was used to support
the researcher’s work is a crucial aspect of our approach. The assets are central in our approach, as
they serve as output of the generated knowledge. We provide an Export assets functionality, which
compresses assets into an archive file, containing individual files for each asset, and a metadata file
which provides provenance data for the files. We use the RO-Crate [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ] for the metadata, which uses
JSON-LD and Schema.org annotations to package research artifacts. During the export process, the user
can provide additional provenance data (i.e., their name and the license of the data). In addition, we use
SPAR ontologies, such as DOCO and DEO [20], to provide more fine-grained semantic annotations for
exported data where appropriate. We envision that the generated RO-Crate bundles will be published
alongside the research articles to provide transparency of the process. The semantic representations of
the generated knowledge provide a more machine-actionable way to access and analyze the knowledge.
      </p>
    </sec>
    <sec id="sec-4">
      <title>4. Implementation and Demonstration</title>
      <p>A screenshot of the prototype user interface is displayed in Figure 1. The previously discussed key
components are depicted in this screenshot. The three main components, Assistants, Assets, and
Tools, are configurable by users. By default, the selected assistant decides what assets and tools are
activated, but users can modify this selection to fit their use cases. We will demonstrate here via a
system walk-through how a research life cycle using the AIssistant can look like. Afterward, we discuss
the technical details of our prototype.</p>
      <sec id="sec-4-1">
        <title>4.1. System Walk-Through</title>
        <p>In our walk-through, we adopt the stance of a researcher who is interested in intertwining Semantic Web
and AI research. We will follow the life cycle as depicted in the sidebar of Figure 1. For demonstration
purposes, we only show domain-agnostic assistants, domain-specific ones are disabled, as can be seen
in the screenshot. A list of assistants is provided in Table 1. A demonstration video is available online.1</p>
        <p>Firstly, the researcher wants to generate ideas related to their topic of interest in the Ideation assistant.
This assistant asks the user to provide content they are interested in. In our example, the researcher
provides a DOI from related papers and an ORCID, which will respectively fetch related content from
Crossref and list articles from ORCID. After refining the ideas via the chat, the researcher adds the final
topics to the ideation asset. Next, the researcher goes to the Research questions assistant and inputs the
previously generated ideation topics from the assets. After iterative refinement in the chat component,
the final research questions are added to the assets.</p>
        <p>As a next step, the researcher aims to find related work via the Related literature assistant. There, the
research questions are provided to the chat and are used to find related work via ORKG Ask [ 21]. The
user manually reviews the suggested literature and adds relevant articles to the bibliography. This is
done via the generative UI approach, where a dedicated literature search component is displayed in the
chat window. This component is displayed only for tools that support literature search. It lists articles,
allows users to select articles, and provides pagination to explore the listed items further.</p>
        <p>Afterward, the paper writing assistants are used: Paper title, Related work, and Proofread. The first
two assistants use the ideation topics and research questions. The related work assistant also uses
the bibliography to connect related work to their citations. The final text and bibliography can be
exported to LaTeX and imported to an Overleaf project as a draft for writing the actual manuscript.
The proofread assistant uses another type of generative UI component, providing a dedicated interface
where users can accept and reject proposed changes via a track-changes-like interface. As a final step
of the walk-through, the authored text is reviewed via the Review assistant.</p>
      </sec>
      <sec id="sec-4-2">
        <title>4.2. Technologies</title>
        <p>The AIssistant is implemented in Typescript and React using the Next.js framework and is published as
open source software under a permissive MIT license.2 We use Next.js both as frontend and backend,
with the backend primarily serving as a wrapper for making calls to the LLMs. We use the OpenAI API,
and specifically the GPT -4o mini model, which provides a good balance between costs and performance.
The Vercel AI SDK ensures that model providers and individual models can be changed when necessary.
Local browser storage via IndexedDB is used to store assets and chat history. For authentication, we
use ORKG accounts with enable single sign-on. The service can only be used when the user is signed in
to ensure the number of daily used tokens can be efectively limited as a means of cost management.
In the future, we will implement a Bring Your Own Key (BYOK) approach, allowing users to utilize
their own API keys to access the platform without imposed token limits. To encourage community
development of both the platform and content, we have published development documentation online.3</p>
      </sec>
    </sec>
    <sec id="sec-5">
      <title>5. Discussion and Conclusion</title>
      <p>The TIB AIssistant is not a direct alternative or replacement of existing LLM user interfaces. The
AIssistant is tailored toward research and provides various advantages compared to regular LLM
interfaces. First and foremost, the integration of assistants provides researchers with a library of curated
prompts, which enables them to use LLMs within their research without the need to craft these prompts
themselves. LLMs themselves provide almost limitless possibilities for research, but without curated
lists of use cases (i.e., prompts), for many researchers, these benefits remain out of reach. Furthermore,
the integrated tool library focuses on research-oriented tools and services, which are not typically
provided by regular LLM interfaces. Tools can utilize dedicated user interface components, via the
generative UI paradigm, to ofer additional interaction possibilities beyond the conversational (i.e.,
text-only) approach of regular LLM interfaces. In the end, we envision the AIssistant as a platform
that integrates many diferent prompts, models, and tools from a wide variety of research domains,
created and maintained by the research communities themselves. Alongside the open source nature
of the AIssistant, the collaboration of research communities to support diferent domains is a key
aspect of our approach. This sets the AIssistant apart from existing approaches and other commercial
initiatives. To facilitate community collaboration, we have provided developer documentation and
an easy-to-use format for defining assistants to encourage community contributions. At the current
stage, we have provided a framework in which the previously mentioned aspects can be integrated. We
demonstrated how diferent assistants and prompts can be used to perform research tasks, however,
the actual implementation of a large-scale domain-specific prompt and tool library is left for future
work. To summarize, although the individual tasks within the assistant can indeed also be executed by
existing LLM interfaces, the AIssistant platform is tailored toward scholarly research. The integration
of diferent scholarly tools and domain-specific prompts into a single platform makes it possible for any
researcher, regardless of the AI proficiency, to leverage AI in their workflows.</p>
      <p>In the current implementation, all assistants use the same model (GPT 4o-mini). The technology stack
supports switching models and providers. For now, we do not want to be limited by the capabilities of
the model, e.g., the ability to select the right tool for tool calling, or the capability to generate research
ideas for arbitrary domains. However, we envision that assistants will use a model tailored to the task
at hand. This means that smaller, locally hosted, or fine-tuned models are most likely viable options for
various assistants. Using such approaches reduces the models’ required resources, benefiting both costs
and environmental impact, and is therefore an important research direction for future work. Another
aspect of future work is the evaluation of our approach. This will focus both on specific assistants and
how well they are able to accomplish their respective objectives, as well as evaluating the platform
from a usability perspective. Experimenting with these smaller models is out of scope for this work.</p>
      <p>To conclude, in this work, we demonstrated what an AI-supported research assistant looks like,
implemented in the TIB AIssistant. With this, we lay the foundation for a comprehensive
communitymaintained platform for researchers who want to leverage AI for their work. We demonstrated how
diferent assistants work together by storing intermediary results in the assets storage. Also, we
showed how external tools play an essential role in providing a research-oriented platform. Finally, we
used a RO-Crate export functionality to provide machine-readable provenance data of the generated
content. In the future, we plan to further simplify the process of adding assistants and tools to foster
3https://tibhannover.gitlab.io/orkg/tib-aissistant/web-app/storybook
further community involvement. To accomplish this, we are experimenting with no-code solutions,
where graphical user interfaces allow users to configure the platform further. Additionally, we plan to
experiment with diferent models and add additional assistants and tools to support more complete
research life cycles for various domains.</p>
    </sec>
    <sec id="sec-6">
      <title>Acknowledgments</title>
      <p>We thank our colleague Mohamad Yaser Jaradeh for his valuable comments in reviewing this paper
Additionally, we want to thank the entire AIssistant team for their contributions to the platform,
including research and development eforts. This work was co-funded by NFDI4DataScience (ID:
460234259) and by the TIB Leibniz Information Centre for Science and Technology.</p>
    </sec>
    <sec id="sec-7">
      <title>Declaration on Generative AI</title>
      <p>During the preparation of this work, the authors used ChatGPT and Grammarly in order to: Paraphrase
and reword, improve writing style, and Grammar and spelling check. Also, the authors used OpenAI
TTS for generating the voice-over in the demo video. After using these services, the authors reviewed
and edited the content as needed and take full responsibility for the publication’s content.
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