<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.0 20120330//EN" "JATS-archivearticle1.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink">
  <front>
    <journal-meta>
      <journal-title-group>
        <journal-title>March</journal-title>
      </journal-title-group>
    </journal-meta>
    <article-meta>
      <title-group>
        <article-title>Automatically Annotating Text with Linked Open Data</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Delia Rusu</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Blaž Fortuna</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Dunja Mladenić</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Artificial Intelligence Laboratory, Jožef Stefan Institute</institution>
          ,
          <addr-line>Ljubljana</addr-line>
          ,
          <country country="SI">Slovenia</country>
        </aff>
      </contrib-group>
      <pub-date>
        <year>2011</year>
      </pub-date>
      <volume>29</volume>
      <issue>2011</issue>
      <abstract>
        <p>This paper presents and evaluates two existing word sense disambiguation approaches which are adapted to annotate text with several popular Linked Open Data datasets. One of the algorithms is based on relationships between resources, while the other one takes advantage of resource definitions provided by the datasets. The aim is to test their applicability when annotating text with resources from WordNet, OpenCyc and DBpedia. The experiments expose several shortcomings related to the current approaches, which are mostly connected to overfitting the datasets. Based on the findings, we indicate future work directions regarding text annotation with Linked Open Data resources, which can bridge these shortcomings.</p>
      </abstract>
      <kwd-group>
        <kwd>eol&gt;Linked Open Data</kwd>
        <kwd>text annotation</kwd>
        <kwd>word sense disambiguation</kwd>
      </kwd-group>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>-</title>
      <p>
        The task of annotating text with LOD resources is closely related
to word sense disambiguation (WSD), defined in natural language
processing as identifying the meaning of words in a given context.
Three main approaches have emerged for determining word
senses [
        <xref ref-type="bibr" rid="ref14">14</xref>
        ]: supervised – employing machine learning methods
for training a classifier on sense-annotated data, unsupervised –
relying on clustering of word occurrences and knowledge-based
which exploits knowledge resources like dictionaries, ontologies
or thesauri. Up to now, most of the effort has been directed to
identifying WordNet senses for ambiguous words, using
Wikipedia for building sense-tagged corpora or extending
WordNet with relationships extracted from Wikipedia.
      </p>
      <p>
        Another area related to annotating text with LOD resources is
ontology matching (establishing mappings between two
ontologies). The task is addressed by using the ontology content
(e.g., concept labels and descriptions) [
        <xref ref-type="bibr" rid="ref9">9</xref>
        ] or, more recently,
ontology structure (relations between the ontology concepts) [
        <xref ref-type="bibr" rid="ref7">7</xref>
        ].
In text annotation, as addressed in this paper, instead of matching
two ontologies, we are dealing with the text to be annotated on
one side, and the ontology, on the other side. Two main
differences reside in the lack of ontology-like structure in text
together with the ambiguity of words, which often depends on the
context.
      </p>
      <p>Up to now, word sense disambiguation approaches have been
mostly developed and tested using WordNet. In this work we
investigate the applicability of two existing WSD approaches to
annotating text with several other LOD datasets. Due to the
scarcity of sense-annotated corpora (mainly available for
WordNet), we consider two knowledge-based algorithms, which
we adapt to the task of automatically annotating text with LOD.
The first approach, based on the Page Rank algorithm relies on the
relations between resources defined within a dataset, while the
second, called Context Similarity, takes advantage of the
humanreadable description of a resource coupled with local relationship
structure. Our experiments are conducted on three LOD datasets:
WordNet, OpenCyc and DBpedia, containing common features
required by the above mentioned WSD approaches: resource
descriptions and a rich set of relationships between resources. The
experimental results reveal the obstacles when attempting to
generalize the current state-of-the-art knowledge-based WSD
approaches across LOD datasets.</p>
      <p>The paper is structured as follows: Section 2 briefly lists related
work, while Section 3 describes the algorithms for annotating text
with Linked Open Data used in the paper. Section 4 elaborates on
the specifics of the datasets that we used in our experiments, and
Section 5 discusses the results obtained thus far. The last part of
the paper is dedicated to conclusions and future work.</p>
    </sec>
    <sec id="sec-2">
      <title>2. RELATED WORK</title>
      <p>
        Supervised approaches to WSD have recorded better results in the
past evaluation workshops, compared to their unsupervised and
knowledge-based counterparts. The best performing system [
        <xref ref-type="bibr" rid="ref5">5</xref>
        ] in
the SemEval 2007 course grained English all-words task [
        <xref ref-type="bibr" rid="ref13">13</xref>
        ] was
a supervised approach based on the Support Vector Machine
algorithm and was trained on several corpora: an English-Chinese
parallel corpora, SemCor (a subset of the Brown corpus, where
words are syntactically and semantically tagged), and the Defence
Science Organisation corpus.
      </p>
      <p>
        Among the knowledge-based approaches, attempts have been
made to exploit the structure of the concept network, devising
either similarity measures (most of them implemented in the
WordNet::Similarity package [
        <xref ref-type="bibr" rid="ref16">16</xref>
        ]) or taking advantage of the
graph structure of the knowledge base. Patwardhan et al [
        <xref ref-type="bibr" rid="ref15">15</xref>
        ] took
the context of the word into account and performed
disambiguation based on various similarity measures. Medelyan
and Legg [
        <xref ref-type="bibr" rid="ref10">10</xref>
        ] used similarity and disjointness and disambiguated
Wikipedia articles into concepts from the Cyc ontology. Previous
attempts to annotate text with Cyc used its taxonomic knowledge
as well as limited context (at the sentence level) or tried to
formally describe the structure of the document, build hypothesis
(interpretations) and try to reason based on them [
        <xref ref-type="bibr" rid="ref6">6</xref>
        ]. Mihalcea et
al. [
        <xref ref-type="bibr" rid="ref11">11</xref>
        ] and Agirre and Soroa [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ] adapt the PageRank algorithm
to disambiguate words based the structure of the WordNet graph.
Navigli and Velardi [
        <xref ref-type="bibr" rid="ref12">12</xref>
        ] propose the Structural Semantic
Interconnections (SSI) algorithm, which further develops lexical
chains (sequences of semantically related words) by encoding a
context free grammar of valid semantic interconnection patterns.
Ponzetto and Navigli [
        <xref ref-type="bibr" rid="ref17">17</xref>
        ] have shown that, when having a
highquality knowledge base (they enriched WordNet with relations
from Wikipedia) simple knowledge-based approaches compete
with state-of-the-art supervised approaches.
      </p>
    </sec>
    <sec id="sec-3">
      <title>3. ALGORITHMS FOR ANNOTATING</title>
    </sec>
    <sec id="sec-4">
      <title>TEXT WITH LINKED OPEN DATA</title>
      <p>The task of annotating text with Linked Open Data is defined as
follows: given a word or an n-gram wa from a text fragment which
is to be annotated, the aim is to identify the corresponding LOD
resource from a set of candidate resources that best matches the
word/n-gram in its context (text fragment). In our
implementations we consider as candidate resources for wa all the
resources defined by the dataset with wa as their rdfs:label.
In this paper we are focusing on three LOD datasets with
crossdomain coverage: WordNet, OpenCyc and DBpedia. We exploit
two characteristics of these datasets. Firstly, we take into account
their structure, which is based on the relations between the
resources. Secondly, where available, we consider the
humanreadable description of a resource generally found under
rdfs:comment. Based on these characteristics, we have adapted
two text annotation algorithms: a structure based one – Page
Rank, and a content-based one: Context Similarity.</p>
    </sec>
    <sec id="sec-5">
      <title>3.1 Page Rank</title>
      <p>
        PageRank [
        <xref ref-type="bibr" rid="ref4">4</xref>
        ] is a well-known algorithm used for ranking the
vertices in a graph representing structure of Web pages. It has
been previously applied to word sense disambiguation into
WordNet [
        <xref ref-type="bibr" rid="ref1 ref11">11, 1</xref>
        ] by building a graph representing the text to
disambiguate and identifying relationships between the vertices
(which describe the words in the text fragment).
      </p>
      <p>The LOD datasets also exhibit a graphical structure based on the
relationships between resources, for e.g., between an instance and
a class described by rdf:type, between a class and its superclass
described by rdfs:subClassOf, and other dataset-specific relations
such as, antonym, meronym and holonym in WordNet and
broader-term relation in OpenCyc. In order to apply the PageRank
algorithm in the case of a LOD dataset, we first build a graph of
the dataset G(V,E) where the vertices represent all the dataset
resources and the edges are the relationships between these
resources. As a next step, we identify all the candidate resources
for all the words belonging to the text fragment, which are to be
annotated. The main difference is the initialization step, which
consists of setting the graph vertices to either of the values 0, if
the vertex does not represent a candidate resource, or 1/R, with R
being the total number of candidate resources. The PageRank
value for each vertex i (PR[Vi]) is computed using the formula:
∑
where N stands for the total number of vertices in the graph and
the damping factor D is set to 0.85. The algorithm converges
when the difference between the previous and current PageRank
values for a vertex is below 10-15 (the numerical error for double
precision). Finally we select the candidate resource with the
highest PageRank score for each word wa.</p>
    </sec>
    <sec id="sec-6">
      <title>3.2 Context Similarity</title>
      <p>
        Many of the LOD datasets have textual definitions attached to
resources: DBpedia, Freebase, OpenCyc, WordNet, etc. For
example, in DBpedia, this definition is the human-readable
description of a resource found under rdfs:comment. Based on this
remark, we adapted the Extended Gloss Overlaps method used in
word sense disambiguation and introduced for WordNet in [
        <xref ref-type="bibr" rid="ref2">2</xref>
        ] by
Banerjee and Pedersen. The method scores each candidate
resource based on the word overlap between the context around
word wa and the human-readable descriptions for a candidate
resource, together with its neighbouring resources (directly
connected to the resource under consideration). The candidate
resource with the highest score for each word/n-gram will be
selected as the annotation. The context of wa is represented by the
surrounding words in the text fragment, for e.g. all words from the
same sentence or paragraph. The overlap between a candidate
resource and the word context is computed using the measure of
cosine similarity (simcos), a standard text mining approach to
compute the similarity between documents. It is defined between
two bag-of-words vectors A and B as
‖ ‖‖ ‖
We summarize the algorithm for computing the similarity
between a word/n-gram wa and a resource in Figure 1. We start by
determining the neighbourhood resources, and the context of wa.
Then, for each resource from the neighbourhood resources, we
compute the cosine similarity between the bag-of-words
representation of the resource definition (NR[i]) and the context of
wa.
      </p>
      <p>ContextSimilarity(resource, wa) returns Similarity</p>
      <p>Similarity = 0
NR = GetNeighborhoodResources(resource)
CW = GetContext(wa)
for i = 1 to Size(NR) do</p>
      <p>CS = simcos(NR[i], CW)</p>
      <p>Similarity = Similarity + CS
end for
return Similarity</p>
    </sec>
    <sec id="sec-7">
      <title>4. DATASETS</title>
    </sec>
    <sec id="sec-8">
      <title>4.1 WordNet</title>
      <p>WordNet1 is a lexical database of English, comprising nouns,
verbs, adjectives and adverbs grouped into synsets. There are two
RDF/OWL representations of WordNet in the LOD: WordNet</p>
      <sec id="sec-8-1">
        <title>1 http://wordnet.princeton.edu/</title>
        <p>(W3C) models WordNet version 2.0, while WordNet (VUA)
models the latest version, 3.0.</p>
        <p>In order to evaluate the aforementioned approaches, we
considered two scenarios: in the first one we opted for a dataset
used in the word sense disambiguation tasks – SemEval 2007
Task 7: Course Grained English All Words. In our second
scenario we used crowdsourcing for evaluating the Context
Similarity measure. The SemEval series of evaluation workshops
are regarded as a framework for comparing state-of-the-art WSD
systems. In Task 7 of SemEval 2007, the participating systems are
provided with a corpus consisting of 5 texts annotated with
WordNet 2.1 senses from sources like the Wall Street Journal (D1
to D3), a Wikipedia entry on computer programming (D4) and an
excerpt from a fiction book (D5). Out of the 2269 annotated
words, 1591 are polysemous (have more than one meaning). The
results of our experiments are summarized in Table 1. The
precision, recall and F measure are the same in this case, as the
system annotates all words and only one annotation/word is
yielded. For WordNet, there is a most-frequent-sense baseline
(which few knowledge-based systems outperform) obtained by
always choosing the first sense of a word in WordNet. Notice that
this first sense in WordNet is also the most frequent sense of that
word, as measured in a corpus called SemCor. In all but D4, which
is domain specific, the baseline performs better than the proposed
approaches; the F measure of the baseline is as high as 85.60% for
D1, and the lowest for D5 – 74.20%; for D4 the F measure is
75.19%. The best supervised system obtained an F measure of
82.50%, while the best unsupervised system recorded 77.04%.
In the second scenario, we used CrowdFlower2, a
labor-ondemand platform where one can assign tasks to a number of
nonexpert workers. Workers were assigned the task to select the
correct human-readable description of a resource (annotation)
from a list of possible descriptions. The example below shows a
marked word for annotation (painter) together with its possible
WordNet resource descriptions, from which the second one
represents a correct annotation. The 4th option (none of the above)
can be chosen in case none of the candidate resources represents a
correct annotation.</p>
        <p>It must have been about the same time when Fra Angelico was
covering the walls of San Marco with his angel pictures, that a
very different kind of {painter} was working the Carmine church
in Florence.
1. painter : a worker who is employed to cover objects with paint
2. painter : an artist who paints
3. catamount, cougar, felis_concolor, mountain_lion, painter:
large American feline resembling a lion
4. none of the above
This scenario serves as a performance baseline for WSD methods
developed for WordNet, when evaluated using crowdsourcing.
The evaluation was done on a corpus composed of 325 words
from the SemEval 2007 Task 7, which is shown in Table 2. We</p>
      </sec>
      <sec id="sec-8-2">
        <title>2 http://crowdflower.com/</title>
      </sec>
      <sec id="sec-8-3">
        <title>3 http://sw.opencyc.org/</title>
        <p>used some of the words as control words, that is, the correct
annotations were reported to the CrowedFlower system which
used them to filter out the workers with bad performance.
Annotations from at least 5 workers were obtained for each word
and as such we distinguish two cases. In the aggregate case the
predominant annotation for a word was selected from the set of all
annotations. In the non-aggregate case each obtained annotation
was considered separately.</p>
        <p>
          The inter-annotator agreement is usually considered an upper
bound for WSD systems [
          <xref ref-type="bibr" rid="ref8">8</xref>
          ]; in our experiments it ranges between
59.61% for D1 to 66.89% for D5. The results when using the
Context Similarity measure are reported in Table 3. We observe
an expected decrease in the F-measure, as we are dealing with
non-expert annotators, while the Context Similarity method
results are close to the inter-annotator agreement.
        </p>
      </sec>
    </sec>
    <sec id="sec-9">
      <title>4.2 OpenCyc</title>
      <p>OpenCyc3 is the open source version of Cyc, a common-sense
knowledge base, covering the top 40% of the complete Cyc
knowledge base. OpenCyc is also available as a downloadable
OWL ontology, and in this paper we refer to the 2008 version.
For the first experiment on OpenCyc we extracted a subset of 177
words from the SemEval 2007 Task 7 corpus, as shown in Table
4. The correct annotations were provided by CrowdFlower
workers, and the workers were selected using the WordNet
control words, as described in the previous sub-section.
Table 4 A corpus used to evaluate OpenCyc annotations,
comprised of 177 words. The table shows the distribution of
the extracted words over the five documents.</p>
      <sec id="sec-9-1">
        <title>OpenCyc</title>
        <p>D1
25
D2
30
D3
43
D4
50
D5
29</p>
      </sec>
      <sec id="sec-9-2">
        <title>Total</title>
        <p>177
it difficult to identify the correct OpenCyc annotations based on
the resource human-readable definition. For example, the word
boy can be resolved in OpenCyc to the following three resources:
1. The collection of all boys (juvenile male humans). A type of
young animal and male person.
2. The collection of male children, male kids about 12 years of
age or less.
3. (son PAR MALE) means that MALE is one of the sons (male
children) of PAR. MALE could be a child of PAR by birth, by
adoption, by marriage (e.g., if PAR had married a biological
parent of MALE), or by some other social arrangement.
Therefore, in our second OpenCyc experiment (see Table 6), we
extracted a similar subset comprised of 50 words from D3 with
more than one candidate resource, which were manually
annotated with OpenCyc resources by 2 expert annotators (A1 and
A2). The inter-annotator agreement was 74.00%. The results
turned out to be more or less the same as the ones obtained via
crowdsourcing and reflect the difficulty of directly transferring
WSD algorithms from WordNet to OpenCyc.</p>
      </sec>
    </sec>
    <sec id="sec-10">
      <title>4.3 DBpedia</title>
      <p>The DBpedia4 dataset is based on a cross-domain ontology with
most concepts representing places, persons, work, species, and
organizations. The ontology was mostly extracted from infoboxes
in Wikipedia. Each DBpedia resource is described by a label, a
short and long English abstract, a link to corresponding Wikipedia
page and a link to the image representation of the resource, when
available.
For evaluation we randomly extracted a subset of words from D3
with more than one candidate resource, similar to the OpenCyc
experiments. These words were manually annotated with DBpedia
resources by one annotator and the results are shown in Table 7.
In the subset of D3 all but two of the words to disambiguate are
general, non-entity words. However, due to high emphasis of
entities in DBpedia, often none of the candidate resources was
correct. For example, in the sentence:</p>
      <p>In France Americans it seems have followed Malcolm Forbes's
hot-air lead and taken to ballooning heady way.
the correct annotation for the word lead would be:</p>
      <p>With this pronunciation, ‘lead’ generally means ‘first’, ‘ahead’,
or ‘guide’.</p>
      <sec id="sec-10-1">
        <title>4 http://dbpedia.org/About</title>
        <p>However, this meaning only appears in the disambiguation page
of lead in Wikipedia and does not have a corresponding resource
in DBpedia. On the other hand, DBpedia lists several other
possible resource candidates: lead as the chemical element, Lead
as a Japanese Hip-Hop Group, etc., all in all 32 candidate
resources for lead.</p>
      </sec>
    </sec>
    <sec id="sec-11">
      <title>5. DISCUSSION</title>
      <p>The LOD datasets that we considered in this paper exhibit
common features: the existence of human-readable resource
descriptions as well as a relationship structure between resources.
However, when applying text annotation approaches (adapted
from state-of-the-art WSD algorithms) which are based on these
common characteristics, the obtained results are not comparable.
In this section we consider several characteristics of the employed
datasets which serve to better understand the obtained results.
Firstly, each of the three datasets under consideration was
developed for a different purpose, which has to be taken into
account when developing annotation algorithms for these datasets.
WordNet is a dictionary-based taxonomy with a good coverage of
the common English lexicon and good, dictionary like,
descriptions. OpenCyc is a common-sense knowledge base
primarily developed for modeling and reasoning about the world.
DBpedia is an effort to extract structured information from
Wikipedia, has only a small upper level layer and, unlike
WordNet and OpenCyc, has a rich set of instances (named entities
such as places, people, and organizations).</p>
      <p>As such, WordNet has the highest ratio of covered words, given
the texts used in experiments. This is due to its dictionary-like
nature and the fact that candidate resources correspond directly
with the possible word meanings. On the other hand, OpenCyc
contains many resources or distinctions between resources which
are important from the reasoning perspective (e.g. the three
candidate resources for the word boy) but are hard to
disambiguate by looking at the word and text alone. The
differences between the three candidates would only become
apparent when faced with distinct reasoning tasks, requiring
various representations of the sentence at hand. This aspect alone
can explain a large portion of the performance gap between
WordNet and OpenCyc annotations. One possible solution is
relaxing the evaluation measures and allowing for more than one
possible annotation to be correct. Moreover, the annotation
algorithms need to assume that there is not always one correct
annotation; there can be more correct annotations or, as it is often
the case with OpenCyc and DBpedia, none.</p>
      <p>Secondly, although all three datasets share common features,
these features are actually quite different due to dataset design.
For example, human-readable descriptions in all three cases are
written in very different genres and target different users.
WordNet descriptions are written similar to dictionary entries,
DBpedia descriptions are, by definition, written like encyclopedia
entries and OpenCyc descriptions are meant as documentation to
the ontology engineer using it to model some world phenomena.
Similarly, relations in all three datasets have very distinct
semantics, and the annotation methods developed or focused on so
far either pay little attention to this or are largely overfitted to the
few relations used in WordNet. Each of the datasets has its own
vocabulary for determining the closeness of concepts. For
example, OpenCyc uses relations such as nearestIsa,
nearestIsaOfType or conceptuallyRelated. WordNet largely
focuses on the closeness of concepts within one part of speech
(e.g. nouns) having less relation types defined between different
parts of speech. Both OpenCyc and DBpedia contain relations
which mostly regard their infrastructure, (wikiPageUsesTemplate
is the most common relation in infobox triplets) and, when
naively used, are not a good indicator of concept closeness (e.g.
PageRank approach from Section 3). To overcome this drawback,
the annotation methods have to better take advantage of the rich
relationship structure of LOD datasets and to allow for an easy
addition of new relations and datasets.</p>
      <p>With the future evolution of LOD, it would also be beneficial to
introduce a model for defining lexical resources, which would be
attached to the LOD resources. Currently, each resource can
contain a label (rdfs:label) in one or more languages. It would be
useful to assign more linguistic meta-data to these labels, such as
part-of-speech, inflected forms (e.g. go, goes, going, went, and
gone), etc. Since this is generally expensive to build, tools for
doing this (semi-)automatically would also be of great benefit.</p>
    </sec>
    <sec id="sec-12">
      <title>6. CONCLUSION AND FUTURE WORK</title>
      <p>In this paper we investigated the applicability of two common
approaches, taken from the word sense disambiguation
community, for annotating text with LOD datasets. One of the
approaches relies on the dataset relationship structure and is based
on the Page Rank algorithm; the second one, called Context
Similarity, takes advantage of the human-readable description of a
resource as well as neighbourhood relationships defined for that
resource. These approaches were chosen based on the common
characteristics of three datasets: WordNet, DBpedia and
OpenCyc. The experimental findings revealed the shortcomings of
the current state-of-the-art word sense disambiguation methods
when applied to different LOD datasets. In the discussion section
we provided several possible explanations for these shortcomings
together with alternatives and solutions.</p>
      <p>As far as future work is concerned, we plan to use the lessons
learned in the experiments we presented in order to further
develop text annotations methods which can offer better
performance on datasets, such as OpenCyc and DBpedia, and can
be, with a reasonable and predictable amount of effort, transferred
to other LOD datasets.</p>
    </sec>
    <sec id="sec-13">
      <title>7. ACKNOWLEDGMENTS</title>
      <p>The research leading to these results has received funding from
the Slovenian Research Agency and the European Union's
Seventh Framework Programme (FP7/2007-2013) under grant
agreement n°257790.</p>
    </sec>
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