<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.0 20120330//EN" "JATS-archivearticle1.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink">
  <front>
    <journal-meta>
      <journal-title-group>
        <journal-title>Two high impact eHealth journals, Journal of Medical Internet
Research and JMIR mHealth and uHealth, were selected as our
data sources. All</journal-title>
      </journal-title-group>
    </journal-meta>
    <article-meta>
      <title-group>
        <article-title>Investigating interdisciplinary knowledge flow from the content perspective of citances</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <string-name>Jin Mao</string-name>
          <email>maojin@whu.edu.cn</email>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Shiyun Wang</string-name>
          <email>wangsy2@whu.edu.cn</email>
          <xref ref-type="aff" rid="aff1">1</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Xianli Shang†</string-name>
          <xref ref-type="aff" rid="aff0">0</xref>
        </contrib>
        <contrib contrib-type="author">
          <string-name>Interdisciplinary research, Content classification, eHealth, In-text</string-name>
          <xref ref-type="aff" rid="aff2">2</xref>
        </contrib>
        <aff id="aff0">
          <label>0</label>
          <institution>Business School</institution>
          ,
          <addr-line>Xinyang Agriculture and Forestry Univ</addr-line>
        </aff>
        <aff id="aff1">
          <label>1</label>
          <institution>School of Information Management, Wuhan University</institution>
          ,
          <addr-line>Wuhan, Hubei</addr-line>
          ,
          <country country="CN">China</country>
        </aff>
        <aff id="aff2">
          <label>2</label>
          <institution>reference</institution>
          ,
          <addr-line>Knowledge integration</addr-line>
        </aff>
      </contrib-group>
      <pub-date>
        <year>2020</year>
      </pub-date>
      <volume>3</volume>
      <issue>416</issue>
      <fpage>40</fpage>
      <lpage>44</lpage>
      <abstract>
        <p>Interdisciplinary research is playing an important role in modern science. In recent years, a lot of studies have measured interdisciplinary knowledge flow based on the frequency of citations. However, this approach does not consider the content of knowledge carried in the citations. In this study, we attempt to investigate the content of knowledge flow towards an interdisciplinary field by analyzing the citation sentences (i.e., citances ) in the articles of the field. An emerging field, eHealth, is chosen in the case study. The associated knowledge phrases between citances and the references of the field are identified and categorized to analyze the content and categories of knowledge spread from the source disciplines to the field. The result shows that the ranks of disciplines by the frequency of associated phrases are consistent with the ranks by the frequency of in-text citations. Distribution of associated phrases over categories and disciplines is also analyzed. The associated phrases of research subject are the most, followed by entity. This study contributes to the understanding of content characteristics about interdisciplinary knowledge integration.</p>
      </abstract>
    </article-meta>
  </front>
  <body>
    <sec id="sec-1">
      <title>CCS CONCEPTS</title>
      <p>• Theory of computation ~ Semantics and reasoning ~ Program
semantics ~ Categorical semantics; • Information systems ~
Information systems applications ~ Data mining; • Information
systems ~ Information retrieval ~ Retrieval tasks and goals ~
Information extraction</p>
    </sec>
    <sec id="sec-2">
      <title>Introduction</title>
      <p>
        Interdisciplinary research has become an important research
paradigm and many recent significant breakthroughs in science
are the fruits of interdisciplinary research. One fundamental
†Corresponding author.
feature of interdisciplinary research is the integration of
knowledge from multiple disciplines out of the field [
        <xref ref-type="bibr" rid="ref1">1</xref>
        ]. Methods,
theories, tools and concepts from different disciplines are often
integrated to solve complex research problems of interdisciplinary
research. To understand the characteristics of interdisciplinary
knowledge integration, citation analysis has often been used to
examine knowledge flow among disciplines[
        <xref ref-type="bibr" rid="ref2">2</xref>
        ]. Conventionally,
the knowledge flow to a field is simply measured by the number
of references cited by the papers in the field. Different importance,
motivations and many other aspects of citations in a paper are
ignored.
      </p>
      <p>
        Recent studies have shifted to investigate interdisciplinary
knowledge flow from a finer-granular perspective by looking into
the content and contexts of citations. Citation contexts have
become more easily obtained in recent years, which embed the
syntactic (e.g., the location of section and rhetoric style) and
semantic (e.g., the meaning of citation content) information of
citations[
        <xref ref-type="bibr" rid="ref3">3</xref>
        ]. Citation contexts have been used to differentiate the
functions[
        <xref ref-type="bibr" rid="ref4 ref5">4-5</xref>
        ], importance[
        <xref ref-type="bibr" rid="ref6">6</xref>
        ] and knowledge contributions[
        <xref ref-type="bibr" rid="ref7">7</xref>
        ] of
different citations. The rich information of citation contexts
enables the analysis on what knowledge is integrated into an
interdisciplinary field.
      </p>
      <p>
        In this study, we attempt to explore the content of knowledge
integrated into an interdisciplinary field, eHealth, by analyzing the
citances. The field of eHealth is an emerging field, referring to all
aspects of the intersection of health care and the Internet[
        <xref ref-type="bibr" rid="ref8">8</xref>
        ]. A
citance that provides the context of a citation is denoted as the
sentence that contains in-text reference information. Our research
questions are what knowledge is integrated from the source
disciplines to eHealth, and what types are the knowledge. In this
study, we design an approach to analyze the content and
categories of the knowledge shared between citances and the
references. This study contributes to understanding the content
characteristics of interdisciplinary knowledge integration.
2
2.1
      </p>
    </sec>
    <sec id="sec-3">
      <title>Methodology</title>
    </sec>
    <sec id="sec-4">
      <title>Data Collection</title>
      <p>Copyright 2020 for this paper by its authors. Use permitted under Creative Commons License Attribution 4.0 International (CC BY 4.0).
parsed from the XML files. Sentences were extracted by using the
punctuations (periods, question marks, etc.) as sentence
boundaries, then citances with in-text references were identified.</p>
      <p>In total, 115,456 citances and 140,572 reference records were
obtained.</p>
      <p>To complete the abstracts of references, the reference records
were fetched by searching PubMed for PubMed ID or Web of
Science (WoS) for DOI. In total, the abstracts of 89,649 reference
records were collected.
2.2</p>
    </sec>
    <sec id="sec-5">
      <title>Source Discipline Identification</title>
      <p>To explore the source of input knowledge, the references were
then categorized into the 22 disciplines of Essential Science
Indicators (ESI). We used the 2018 version of ESI journal list that
covers 11,727 journals with full titles, abbreviated titles and their
disciplines they belong to.</p>
      <p>We designed a pipeline to determine the ESI disciplines of the
references. First, 7,393 distinct journal titles were obtained from
the 104,888 reference records with the citation type of ‘journal’
and with DOI/PubMed ID. We manually completed the full titles
for the abbreviated journal titles that cannot be found in the ESI
journal list but with more than 2 references. Next, we identified
the disciplines of references by matching their journal titles with
the journal titles in ESI. However, there were still 8,393 reference
records without the ESI discipline information. Since the coverage
of journals in ESI is not as broad as in WoS journal list, the WoS
subject categories were then used to infer the ESI disciplines of
the journal titles that were not matched directly. We designed a
method to map the WoS subject categories into the ESI
disciplines. We calculated the likelihood of a WoS subject
category belonging to an ESI discipline through its journals whose
ESI disciplines are known. The ESI discipline with the highest
probability was then determined as the ESI discipline of the WoS
category. If a journal has multiple WoS subject categories, we
also chose the ESI discipline that has the highest probability with
all the WoS categories.</p>
      <p>Finally, approximately 94.09% of journal reference records
(98,685) get the discipline information.</p>
    </sec>
    <sec id="sec-6">
      <title>Classifying</title>
    </sec>
    <sec id="sec-7">
      <title>Associated 2.3</title>
    </sec>
    <sec id="sec-8">
      <title>Extracting and</title>
    </sec>
    <sec id="sec-9">
      <title>Knowledge Phrases</title>
      <p>
        Citation contexts contain information about the cited articles
relevant to the citing papers[
        <xref ref-type="bibr" rid="ref10 ref9">9-10</xref>
        ]. We contempt that the words
occurred in both citation context and the corresponding cited
paper can reflect the explicit knowledge association between the
two to a certain extent. In this study, we used the title and abstract
to represent a cited paper (i.e., a reference) due to the difficulty of
obtaining full text. We extracted noun phrases that carry
meaningful concepts from the citances as well as the titles and
abstracts of the references by using the package of spaCy, an
open-source python natural language processing toolkit. Noun
phrases with a single character or some wildcards (e.g., “#”, “*”,
“@”, etc.) were removed. So were those starting or ending with a
number. Stop words listed in the NLTK package were also
eliminated. Acronyms were identified and expanded into their full
forms by using the scispaCy package. We used both the acronyms
and their full forms in the matching process, but only retained the
raw forms of the noun phrases extracted from the citances. Thus,
an associated knowledge phrase is defined as a noun phrase
appearing in both a citance and its reference, which could be
regarded as the knowledge transferred from the reference to the
citing paper.
      </p>
      <p>
        To analyze the types of the knowledge that flows to the eHealth
field, we designed a classification framework of associated
knowledge phrases based on the previous studies [
        <xref ref-type="bibr" rid="ref11 ref12 ref13">11-13</xref>
        ]. Two
graduate students familiar with the field of eHealth were recruited
to annotate the categories of the associated knowledge phrases by
following the steps:
1.
2.
      </p>
      <p>Initializing knowledge classification framework. One author
constructed a preliminary classification schema after
reviewing the literature. Then the author randomly selected
100 knowledge phrases for trial annotation, organized the
annotation details, and wrote an annotation specification
document that provides detailed definition to each category
with a few exemplar concepts.</p>
      <p>Pre-annotation. Pre-annotation training was carried out for
the two coders. Subsequently, two coders independently
annotated 500 identical knowledge phrases randomly
selected for pre-annotation. After labeling, we calculated the
kappa statistics to assess the agreement of the two coders.
The kappa was equal to 0.65, which was not as good as
expected. Thus, two coders discussed the ambiguous cases
with a professional in the eHealth field. We find some
phrases may not make sense if they appear alone, but they
are meaningful in the given context, therefore, there were
many phrases that categorized into the research subject
category or others category by different coders. After the
discussion, two coders reached a consensus.
included in the
above categories</p>
      <p>USA</p>
      <p>Formal annotation. The two coders annotated all 24,132
unique phrases. During the annotation process, two coders
maintained communication with the professional in the
eHealth field to reach an agreement.</p>
      <p>Our final framework contains seven categories, including research
subject, theory, research methodology, technology, entity, data
and others, which are defined in detail in Table 1.
3
3.1</p>
    </sec>
    <sec id="sec-10">
      <title>Results</title>
    </sec>
    <sec id="sec-11">
      <title>Dataset Description</title>
      <p>We obtained 3,221 papers from the eHealth field with the
publication year between 1999 and 2018. Some characteristics of
our dataset for analysis are given in Table 2. In total, 115,456
citances and 98,685 reference records (55,744 distinct articles)
with discipline information were extracted from our corpus. The
98,685 reference records were cited a total of 134,516 times (i.e.,
in-text references) in all citances. Roughly 90% of the reference
records have abstracts.</p>
    </sec>
    <sec id="sec-12">
      <title>Source Disciplines</title>
      <p>
        To address our research question, we analyzed the distribution of
references over disciplines. Table 3 shows the number of unique
cited articles, CountOne citations, and in-text citations for the 22
disciplines. The CountOne citations were obtained by counting
each reference only once in a citing paper, whereas the in-text
citations count all the mentions of references in the paper[
        <xref ref-type="bibr" rid="ref14">14</xref>
        ]. The
disciplines are ranked by the number of unique references. It’s
observed that the ranks of the disciplines by CountOne citations
are the same as the ranks by in-text citations. In the following
analysis, we choose the top 10 disciplines with most unique
references, which cover 96.95% of all unique references.
3.3
      </p>
    </sec>
    <sec id="sec-13">
      <title>Distribution of Associated</title>
    </sec>
    <sec id="sec-14">
      <title>Phrases over Disciplines</title>
    </sec>
    <sec id="sec-15">
      <title>Knowledge</title>
      <p>In total, 215,138 associated knowledge phrases were extracted
between the citances and the 123,206 in-text references with
abstracts. Here, we only analyze 211,454 knowledge phrases
associated with the top 10 disciplines (98.29% of all). Table 4
presents the frequency of associated knowledge phrases by
discipline. It should be noted that only references with abstracts
were used to extract associated knowledge phrases, therefore, the
numbers of in-text citations in Table 4 are different from those in
Table 3. Clinical Medicine contains the most associated
knowledge phrases, followed by Social Sciences, General and
Psychiatry/Psychology. The ranks of disciplines by the frequency
of associated knowledge phrases are in harmony with the ranks by
the frequency of in-text citations.</p>
      <p>In addition, we calculated the knowledge density in the flow (i.e.,
the average number of phrases per citation) through dividing the
frequency of phrases by the number of citations for each
discipline. On average, every citation from the disciplines carried
more than one associated knowledge phrase. The scores of
knowledge density are slightly different between the 10
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22</p>
      <sec id="sec-15-1">
        <title>Clinical Medicine</title>
        <p>Social Sciences,
General
Psychiatry /
Psychology
Neuroscience &amp;
Behavior
Multidisciplinary</p>
      </sec>
      <sec id="sec-15-2">
        <title>Computer Science</title>
      </sec>
      <sec id="sec-15-3">
        <title>Immunology</title>
        <p>Economics &amp;
Business
Biology &amp;
Biochemistry
Pharmacology &amp;
Toxicology
Agricultural
Sciences
Engineering
Molecular Biology
&amp; Genetics
Mathematics
Environment /
Ecology
Chemistry</p>
      </sec>
      <sec id="sec-15-4">
        <title>Microbiology Plant &amp; Science Physics</title>
      </sec>
      <sec id="sec-15-5">
        <title>Geosciences</title>
      </sec>
      <sec id="sec-15-6">
        <title>Materials Science</title>
      </sec>
      <sec id="sec-15-7">
        <title>Space Science</title>
        <p>Animal
9371
1914
1259
1153
839
693
632
567
546
303
254
181
181
80
51
46
27
26
5
2
47968
22530
15915
2414
2052
1660
1185
949
1041
710
839
357
323
271
216
91
53
47
30
26
6
2</p>
        <p>In-text
citations
66673
30196
21606
3152
2754
2278
1464
1222
1398
963
1145
441
425
312
249
94
44
38
36
15
9
2
disciplines. Pharmacology &amp; Toxicology exceeds other source
disciplines, with the most phrases per citation, while Computer
Science contains the fewest phrases per citation.
other disciplines. Computer Science has a higher proportion of
technology phrases comparing with other disciplines. This could
be explained by that Computer Science provides the study of
eHealth with a lot of technique support, and many eHealth
research problems are related to Computer Science.
According to the annotation result, the number of associated
knowledge phrases is shown for each category in Figure 1. The
phrases in the category of research subject are the most,
accounting for 43.8%. It shows that authors usually cite references
related to their research subject. One noticeable thing is that there
are many phrases in others, which is the second most. Such
phrases often involve specific authors’ names, geolocations,
specific projects, funding and some meaningless phrases. These
phrases are not subdivided in our classification framework. In
addition, the categories of entity and technology have more
phrases than research methodology. This result may be due to the
field of our corpus is medical-related, the research in which
requires the use of many medical instruments, and the research
entities it targets often varies in terms of research subjects (e.g.,
different diseases).</p>
        <p>Figure 2 presents the number of associated knowledge phrases in
different categories over the disciplines. The knowledge category
distribution over different disciplines is significantly different
(Pearson Chi Square test, p-value &lt; 0.001). The top 3 disciplines,
Clinical Medicine, Social Sciences, General, and Psychiatry/
Psychology, supply the most numbers of phrases in all categories.
For each discipline, most of the associated knowledge phrases are
research subjects.</p>
        <p>In general, the distribution of associated knowledge phrases in
each discipline over the categories are similar to the overall
distribution in the entire dataset. However, a few exceptions are
also observed. The proportion of theory phrases over all the
phrases in Economics &amp; Business are much higher than that in
This study investigates the knowledge flow towards the
interdisciplinary field of eHealth from the perspective of
knowledge content. We extracted the knowledge phrases shared
between the citances in the field with the references to represent
knowledge content spread from source disciplines to the field. A
classification framework was applied to annotate the identified
knowledge phrases to explore the knowledge types of the phrases.
The interdisciplinary features of eHealth are shown by analyzing
the associated knowledge phrases.</p>
        <p>The findings of this study could provide a few insightful
implications on interdisciplinary knowledge integration. The
result shows that the ranks of disciplines by the frequency of
associated phrases are consistent with the ranks by the frequency
of in-text citations. It means that to measure interdisciplinary
knowledge flow, an indicator based on the frequency of shared
phrases may produce similar results with the indicator using the
frequency of references, in that the in-text references from
different disciplines often carry similar amounts of phrases (Table
4). Associated phrases can indicate the spread content, which may
be useful to generate knowledge map of interdisciplinary
knowledge integration. However, they do not directly differentiate
citations, thus, it is not enough to only consider phrase frequencies
to measure interdisciplinary knowledge integration at the aspect of
content.</p>
        <p>The frequency distribution of knowledge phrases over the
categories is heavily skewed. Except others, the most in-text
references carry the phrases of research subject, followed by
entity. The results show the distribution of different types of
knowledge from the source disciplines. The types of knowledge
phrases can be used as an important feature to differentiate
references, for instance, the motivations of citations. The
categories of knowledge will be helpful to understand the roles of
source disciplines in the knowledge integration of an
interdisciplinary field.</p>
        <p>A few limitations can be identified as well. To obtain full text of
research articles, we only chose the two open access journals to
represent the field of eHealth, which may not cover all the articles
of this field. The problem of data deficiency is common in
fulltext based domain analysis. To identify the knowledge transferred
from source disciplines to the interdisciplinary field, shared
phrases are extracted by using simple text matching. However,
synonyms are often used in citing others’ work, thus the coverage
of the shared knowledge may be in short.</p>
        <p>We also identified some directions of future research. We
manually annotated the categories of associated phrases. To
support the analysis on large scale datasets, automating the
classification of spread knowledge is on great demand, which is a
challenging task of our interest. This motivates us to design a
more general classification framework to analyze the content of
knowledge spread between disciplines. In addition, recent
machine learning techniques will be applied to this task in our
future study.</p>
      </sec>
    </sec>
    <sec id="sec-16">
      <title>ACKNOWLEDGMENTS</title>
      <p>This study was funded by the National Natural Science
Foundation of China (Grant No. 71804135) and Ministry of
Education Humanities and Social Sciences project in China (Grant
No.19YJC870018). We also thank Jing Tang for helping us with
the data processing.</p>
    </sec>
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